Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03458 ATGATAAACCAAACCAGGCAGCAGACAAAGTACTGTTTGGGGTTCCCATCACATGGCTCTAAGAAGGGGCATCACAGTTATAATAACAATTATGGTAATGAGGACGAAGATGTAGCTTTTGAGAAAATGCGAAAAGAAATTGAGGGAAATCAGGATAGTGCATTGAGTCTATGTACTGAGAAGGTTTTGTTGGCGCGACAAGCGTATGACCTGATAGATAGCCACGTTAAACGACTTGATGAGGATTTAAACAACTTTGCTGAAGATTTAAAGCAAGAGGGTAAAATACCACCGGATGAACCAGCAATTCTGCCCCCATTGCCTATAGTCCCTAAAGCTGAAAAGCGCAAGCCCATATACATAACTCCTCAGCCAAAGAGAATTGATTACAGGGATAGAGATTGGGATCGGGAGCGCGATAGGGACTTTGAGTTAATGCCTCCACCAGGAAGTCATAAGAAAGAGTATGCTACCCCAATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTCGGGGATATGATTGCGTGTGACAACGAAAATTGCCAAGGAGGTGAATGGTTCCACTATTCGTGTGTTGGGCTAACGCAGGAGACAAGGTTCAAGGGAAAGTGTGGGCTCACTCAGGCCTTGTATAAAGTCCTCTAG 678 0.4366 MINQTRQQTKYCLGFPSHGSKKGHHSYNNNYGNEDEDVAFEKMRKEIEGNQDSALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPAILPPLPIVPKAEKRKPIYITPQPKRIDYRDRDWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKCGLTQALYKVL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03458 225 Pfam Inhibitor of growth proteins N-terminal histone-binding 26 86 IPR024610 -
Vimu6g03458 225 Gene3D - 2 84 - -
Vimu6g03458 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 219 IPR013083 -
Vimu6g03458 225 MobiDBLite consensus disorder prediction 1 29 - -
Vimu6g03458 225 SUPERFAMILY FYVE/PHD zinc finger 148 209 IPR011011 -
Vimu6g03458 225 FunFam PHD finger protein ING 165 220 - -
Vimu6g03458 225 PANTHER INHIBITOR OF GROWTH PROTEIN 3 214 IPR028651 -
Vimu6g03458 225 CDD PHD_ING 173 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03458 Vimu-Chr6 31327184 31332658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03458 - - gmx:100787916 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03458 6 31327184 31332658 Vimu6g03458 6 31327184 31332658 ECH