Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03455 ACTGCAGATTTATTGCAAAATTTGACCCTGGATTCTGAGCCAAAAGCCATTGGAGTTACCGAGCCTGCGAAGAAGGTGCTTCAAGCTTTCCAATTCACTGTTTCATTTTCTTTGAATGGACCTGGTTTTTCCAAGGGTGCAGCCAAAGGGATGGGCAAGCCGTTCAATCCAAATTCAAGCTTTGTTCCAAATGGATACCCTTCGGCATACTATTATGGAGGTTATGATGGGCAAGGTGATTGGAATGTTTATTCCAGATATATGAACCTTGATGGGGGCATGGCTCAGGGTGTTTATGGAGACAACTGCTCTTATATGTATCATCACGGTTATGGTTATACACCATATGGAACATATGCACCGGCCAATTCCTCTTCTCCAATGATTCAACAAGATGGTCAGCATTATGCGCTGCAACAGTACCAATATCCATGTTCTTATTACAAATCTCCAGCTTCTGCTGACGTGTCATTTACTCCAAACAAAATCACTGCTACACAAGAAGAAATATCAACTGCAATTGATGCTGATCATGTTGCTTCATTAAATGTTATGAATAAAGGAAACACCGTTAACATGGCCAATAGTGATTTTACAAATAAAAATGGGTTAAATTCATTTTTAACAGGTTCCCAGCATACAACATTGCATTCAAATGATTCTTATCAAGGGACTAGCTTGCCACCTTATGCCCCTTTGTCAGGATATCAGGGCCCTAGAATGAGTACCCATGCTACACAATTGCCAGTCCCATCAGATATGTCCTTAATATCTGATAGACAGTCCAAACGTGGAGCCAAGGTTGGTTTATCTTCATCAATGGCCCCTGTCAAAGATTTTTCTTCTCAAAGGAATCAAGGACTTCTTCAGCAACTTCCATCTTTTCCGAACTTGAATGGTTCCAGACATCCATCTGGACTTGAACTGGTTTCTGGATTCATGAACGGGATGTATCCAAGCAACAGGATGTACAGCCAATTTGGGAACACATTTAGGGCTAATTCTCGTTTTGGATCTGCTGCATATGGATCTAGAATGGGCTCAGTTGATTACAAGCGTCATGCCACAGGTGACGGCAATGGTTTTAAAAAAAGTATGGAAGGTTTCAGTGAGCTAAACAAGGGACCAAGAGCTGCCAAAAGTTCTGATAATAAAAATAACAAGAGTCTTGGACCTGTTACATTACTACTGAAAGGACAGAACCTTCCTGTGAAGAGCGATAACAAAGAAGTTCTTTTAGTACCCAATGAGGAACAGTACAATGGGAAAGATTTTTCGGAGAATTATTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCATAAAAGCATTAAGTATAGTGTTTGGGCAAGTACTCCTAATGGCAATAAAAAACTGGATGCGGCATATCAAGAAGCGAAGGGAAAGACTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGTTGGGTCCTGTTGATTTTGGTAAAAGTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGCGCATTGAGGCATATAACACTAGAAAACAATGAAAACAAACCTGTAACAAATAGCAGGGATACTCAGGAGGTTAAGTTTGAGAAGGGAGTTCAAGTTGTAAAAGTTTTCAAGGAGCATTCAAGCCAAACATGCATCTTGGATGATTTTGAGTTTTATGAGGCTCGTGAAAAGGCAACTCAGGAGAAAAAATCTAAGGAGCAGCAGTTCCCAAAACAGATCAGCAAACCCAGTGATTTAACAATTGGGACAGACACATTACTGAAGTCTCTAGATGCTACCTTGATGAAGGAAGCTGCTACTGCAAATACACCAGAAGATAGAATGAATTCAGAGGGCCCCCTAGAAGGAGGAGATGGATCTACCACAGCACCTGAAGACTCTTAA 1983 0.407 TADLLQNLTLDSEPKAIGVTEPAKKVLQAFQFTVSFSLNGPGFSKGAAKGMGKPFNPNSSFVPNGYPSAYYYGGYDGQGDWNVYSRYMNLDGGMAQGVYGDNCSYMYHHGYGYTPYGTYAPANSSSPMIQQDGQHYALQQYQYPCSYYKSPASADVSFTPNKITATQEEISTAIDADHVASLNVMNKGNTVNMANSDFTNKNGLNSFLTGSQHTTLHSNDSYQGTSLPPYAPLSGYQGPRMSTHATQLPVPSDMSLISDRQSKRGAKVGLSSSMAPVKDFSSQRNQGLLQQLPSFPNLNGSRHPSGLELVSGFMNGMYPSNRMYSQFGNTFRANSRFGSAAYGSRMGSVDYKRHATGDGNGFKKSMEGFSELNKGPRAAKSSDNKNNKSLGPVTLLLKGQNLPVKSDNKEVLLVPNEEQYNGKDFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKGKTGGCPIFLLFSVNTSGQFVGLAEMLGPVDFGKSVDYWQQDRWTGCFSVKWHVIKDIPNSALRHITLENNENKPVTNSRDTQEVKFEKGVQVVKVFKEHSSQTCILDDFEFYEAREKATQEKKSKEQQFPKQISKPSDLTIGTDTLLKSLDATLMKEAATANTPEDRMNSEGPLEGGDGSTTAPEDS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03455 660 CDD YTH 433 569 IPR007275 GO:0003723
Vimu6g03455 660 Gene3D ph1033 like domains 413 584 - -
Vimu6g03455 660 MobiDBLite consensus disorder prediction 631 660 - -
Vimu6g03455 660 FunFam YTH domain family 1, isoform CRA_a 412 584 - -
Vimu6g03455 660 MobiDBLite consensus disorder prediction 366 390 - -
Vimu6g03455 660 MobiDBLite consensus disorder prediction 594 613 - -
Vimu6g03455 660 Pfam YT521-B-like domain 432 570 IPR007275 GO:0003723
Vimu6g03455 660 ProSiteProfiles YTH domain profile. 432 569 IPR007275 GO:0003723
Vimu6g03455 660 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 81 639 IPR045168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03455 Vimu-Chr6 31304775 31308202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03455 - K20102 gmx:100818027 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03455 6 31304775 31308202 Vimu6g03455 6 31304775 31308202 ECH