Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03451 ATGAGACCCCCCAGAGGCGGTGGCCGCGGTGGCGGTTTCAGGGGTGGCCGCGACGGTGGCGGTCGCGGTAGAGGTGGATTTGGTCGTGGCGGCGGAGGACGCGGCGGTGGCGGTTTTCGCGACGAAGGACCACCCTCCGAAGTTGTAGAAGTTGCAACGTTTATGCATGCATGTGAGGGAGATGCCGTGACAAAGCTTACGAACGAGAAAGTTCCCTATTTCAATGCTCCTATATATCTGAAAAACATGACTCAGATCGGGAAAGTTGATGAAATATTTGGCCCCATCAACGAAGCTTACTTCTCAATTAAAATGATGGAAGGGATTGTTGCTACCTCTTATTCAGCTGGGGACAAGTTTTACATTGATCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAACCTAAGGGACAAGCACAAGCTGGTAGAGGTGGAGGCGGAGGAGGTCGTGGTGGTGGCAGAGGTGGGCGTGGAGGTGGTGGAGGTTTTCGTGGAGGTGGTGGTTTTCGTGGGAGAGGTGGCCCAAGGGGTGGGAGAGGTGGTCCTCCTAGGGGTGGGGGTTTCAGGGGAAGGGGAAGATCATAA 591 0.5431 MRPPRGGGRGGGFRGGRDGGGRGRGGFGRGGGGRGGGGFRDEGPPSEVVEVATFMHACEGDAVTKLTNEKVPYFNAPIYLKNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSAGDKFYIDPRKLLPLARFLPQPKGQAQAGRGGGGGGRGGGRGGRGGGGGFRGGGGFRGRGGPRGGRGGPPRGGGFRGRGRS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03451 196 MobiDBLite consensus disorder prediction 137 196 - -
Vimu6g03451 196 SUPERFAMILY Translation proteins 49 123 IPR009000 -
Vimu6g03451 196 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 9 189 - -
Vimu6g03451 196 Pfam Gar1/Naf1 RNA binding region 48 134 IPR007504 GO:0001522|GO:0042254
Vimu6g03451 196 FunFam H/ACA ribonucleoprotein complex subunit 44 135 - -
Vimu6g03451 196 MobiDBLite consensus disorder prediction 1 45 - -
Vimu6g03451 196 Gene3D Probable tRNA pseudouridine synthase domain 44 135 IPR038664 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03451 K11128 - gmx:100788981 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03451 6 31267727 31269269 Vimu6g03451 6 31267727 31269269 ECH