Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03445 ATGACAGAGGACCTTGAATGGCGCGTCCTGAGTGAGAGTGAGAAAGAGAGGGAAAGGAAAGGAAGGAGGAAGTCTCTCTTATTATGTGTGTCCACATTCATTCATTGCCATTGCTTTCTTCCAACCCTTTCAACCCAGCAACACACTATAAAACCCCTTTCACCATCACATGCCATACCCACACCACACTCCAAATTCCCCTCAGATTCAGATACCCAATCTCTCTTTTTTTCTGGCAGGGCTGAAAGGCAGAAGCTACTGAACCAAAAGGGATGTGTTGTATGGATTACTGGACTCAGCGGATCAGGAAAAAGCACATTGGCATGTTCCCTAAGCAGAGAACTGTATTCAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTTCGGCATGGACTAAACAAAGATCTTGGTTTTAAAGCTGAAGAACGCACTGAAAACATTCGCAGAACTGGAGAAGTGGCAAAACTCTTTGCTGATGCTGGTTTGATATGTGTTGCCAGCCTGATATCTCCTTACAGAAGAGATCGAGACACTTGCCGATCCATGTTACCTGATGCGAATTTTATTGAGGCAAGGCACCATGAAGCAATTCTTATCGTTTTCATGAACATGCCCCTAGAATTGTGTGAGCTACGAGATCCAAAAGGCCTCTATAAGCTTGCTCGTGCGGGAAAAATCAAAGGTTTTACCGGCATTGATGACCCATATGAGCCACCCTTAAATTGCGAGGTACATGTTCCTGAAGCTTCTAAAGCTATTGAGATAAAGCAGGATGGTGACGTTTGTCCAACACCTACTGTGATGGCTGGACAAGTAGTTACTTACTTGGAGAAGGAAGGTTTTCTTGAACATTAG 861 0.4402 MTEDLEWRVLSESEKERERKGRRKSLLLCVSTFIHCHCFLPTLSTQQHTIKPLSPSHAIPTPHSKFPSDSDTQSLFFSGRAERQKLLNQKGCVVWITGLSGSGKSTLACSLSRELYSRGKLSYVLDGDNLRHGLNKDLGFKAEERTENIRRTGEVAKLFADAGLICVASLISPYRRDRDTCRSMLPDANFIEARHHEAILIVFMNMPLELCELRDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEVHVPEASKAIEIKQDGDVCPTPTVMAGQVVTYLEKEGFLEH 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03445 286 MobiDBLite consensus disorder prediction 51 72 - -
Vimu6g03445 286 NCBIfam adenylyl-sulfate kinase 81 255 IPR002891 GO:0000103|GO:0004020|GO:0005524
Vimu6g03445 286 CDD APSK 93 248 IPR002891 GO:0000103|GO:0004020|GO:0005524
Vimu6g03445 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 252 IPR027417 -
Vimu6g03445 286 Gene3D - 74 285 IPR027417 -
Vimu6g03445 286 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 80 267 - -
Vimu6g03445 286 Pfam Adenylylsulphate kinase 90 251 - -
Vimu6g03445 286 Hamap Adenylyl-sulfate kinase [cysC]. 89 282 IPR002891 GO:0000103|GO:0004020|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03445 Vimu-Chr6 31198189 31203357 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03445 K00860 - gmx:100793200 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03445 6 31198189 31203357 Vimu6g03445 6 31198189 31203357 ECH