Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03443 ATGAAGAGCATGGTGACGCCATTGACGAGGGTCTCACCCTTTCGTCACCGAAATGGCCACAATACCCTTCCCTTCTTCTCTCACGCACGCTACCCTTCCTCACCAAACTTCTCTTTCTCCCCTCTCTCTCTCACTATTTCCATGGCCGCTTCACCCAAATTTTCCGCTCCGGCTGTGCCGCGTGGTGATGCCAACATCGACAAAGATGGTGTATTTCAATTGATTCAAGCACATCAGGAAAAAGCTGCTAGACTTTCTCCAGTTGAGGAAATTCGAACTGTCCTTGATCGTAGCGTTCGCGGGATGCTCTCTACATTCTCCAAGAAGTTCGATGGCTATCCATCAGGGTCTATGGTTGACTTTGCATGTGATGCAAATGGATATCCTATATTAGCAGTGAGCGATCTGGCAGTTCATTCCAAGGACCTAACTGCCAATCCTAAATGCTCATTACTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATTACTTTACACGGTGATGCTATCACTGTACCTGAAAAGGATAAAGAAGCTGTTCGAGCTGCATATTTGGCAAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCAAATTCTTGCGCATTGAACCGAAAGTTGTACGATTTGTGTCAGGTGTTGCTACAGCTTTGTTAGGATCAGGAGAGTTTACTAGAGATGAGTATAAATCTGCAAAAGTTGACCCCATAGCTCAGTTTTCCAAGCCAGTGGCGTCTCATATGAACAAGGATCATGCTGACGATAACAAAGTGATAGTGCAGCATTGGACCTCAGTTCCAGTGGACTTTGCATACCTTCTAGATTTGGATAGTCTTGGTTTCAATGTTAAGGCTGGTTATCAGGGTGATACTTTCAAGCTTCGTGTACCTTTCCCTCGACGTGCAGAAGATAGAAAGGATGTGAAGACTCTCATTGTTGAGATGCTTCAAGCTGCCAGACCTAAAGCTGAATGA 984 0.4502 MKSMVTPLTRVSPFRHRNGHNTLPFFSHARYPSSPNFSFSPLSLTISMAASPKFSAPAVPRGDANIDKDGVFQLIQAHQEKAARLSPVEEIRTVLDRSVRGMLSTFSKKFDGYPSGSMVDFACDANGYPILAVSDLAVHSKDLTANPKCSLLVARDPEDRTDLVITLHGDAITVPEKDKEAVRAAYLARHPNAFWVDFGDFKFLRIEPKVVRFVSGVATALLGSGEFTRDEYKSAKVDPIAQFSKPVASHMNKDHADDNKVIVQHWTSVPVDFAYLLDLDSLGFNVKAGYQGDTFKLRVPFPRRAEDRKDVKTLIVEMLQAARPKAE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03443 327 Gene3D - 237 327 IPR037119 -
Vimu6g03443 327 Gene3D - 70 222 IPR012349 -
Vimu6g03443 327 PANTHER CREG1 PROTEIN 78 322 - -
Vimu6g03443 327 SUPERFAMILY FMN-binding split barrel 88 323 - -
Vimu6g03443 327 Pfam Pyridoxamine 5'-phosphate oxidase 92 215 - -
Vimu6g03443 327 Pfam Domain of unknown function (DUF2470) 245 318 IPR019595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03443 Vimu-Chr6 31188816 31192943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03443 - - gmx:100793739 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03443 6 31188816 31192943 Vimu6g03443 6 31188816 31192943 ECH