Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03436 ATGGAGTTTGAAGCAGGATTAGGATTTGGTAAGATAGCACCTGAAAAAGCATTGTTCTCAGGGGTAGCAGAAGATGTGGAAGGATTGTTGCAAGGTTGTGATTGGTCATGGAATGAGCAAATTGTGATTGAACCCCTCTTGATTGATAATTCTCAACCTTTGACTCAATCTTCATTGATATATCTGATTCAAGGAATTGGGAACTGCTCTTCCTTGTTACTGGTGGATGGGAACTTTATAGAAGAGGTTTTGTCTACCAGAAAGAGGGTTGGATACGTTTCTGTGCTCTTCTATGCTTCCTGGTGTCCTTTTTCTCACAGAATACTTCCTGAATTTGAAATTCTTAGCTCTATGTTTCATCAAGTAGAACATGTAGCACTTGAACAGTCATCGGCTTTGCCAAGCTTGTATTCAAAATATGGAATCCATAGCTTACCTGCAATACTACTGGTGAACCAGACATCTAGAGTGAGATATCATGGTCCAAACAATCTTGACTCCCTTGTAGAATTTTATGCGAGAAACACAGGATTAGAAGCCAGGGACAAGGTTGTTGTTGGTGAAGTAAGCAACTTGATGAGTGATGAACATTCAACTATAAAGGGCTTCTCCCTTGGAGAGATATCAAGAAGGGAACCTTACTTGGCATTATCGATATTGTTTCTATGTCTGAGAATTATTCTCTCTGTATTTCCCACGATTATGCCACATCTCAAAGCATTCTGTTCATCCTATGTTAATCATCTGAGCTTTCAAAAGCTTGGCCAAGTGATGGAACGTGTTCTTCATGTAATGGATGTGAAGAGGATTTGGACCAAGCTAGAAGAACTCTGTAAGAGCAGGAGCTTTCATGAGAGGGCAAGGAGTGCCAGAGTTTGGGCCTCATCTCTGGCTTCTGTTTCCCTTGGTGATTCTTCAGCTAAGTGA 927 0.4088 MEFEAGLGFGKIAPEKALFSGVAEDVEGLLQGCDWSWNEQIVIEPLLIDNSQPLTQSSLIYLIQGIGNCSSLLLVDGNFIEEVLSTRKRVGYVSVLFYASWCPFSHRILPEFEILSSMFHQVEHVALEQSSALPSLYSKYGIHSLPAILLVNQTSRVRYHGPNNLDSLVEFYARNTGLEARDKVVVGEVSNLMSDEHSTIKGFSLGEISRREPYLALSILFLCLRIILSVFPTIMPHLKAFCSSYVNHLSFQKLGQVMERVLHVMDVKRIWTKLEELCKSRSFHERARSARVWASSLASVSLGDSSAK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03436 308 ProSiteProfiles Thioredoxin domain profile. 61 177 IPR013766 -
Vimu6g03436 308 Pfam Thioredoxin 74 172 IPR013766 -
Vimu6g03436 308 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 70 307 IPR044794 -
Vimu6g03436 308 Gene3D Glutaredoxin 69 186 - -
Vimu6g03436 308 SUPERFAMILY Thioredoxin-like 74 176 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03436 Vimu-Chr6 31125816 31129246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03436 - - pvu:PHAVU_001G1116001 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03436 6 31125816 31129246 Vimu6g03436 6 31125816 31129246 ECH
Vimu6g03436 6 31125816 31129246 Vimu8g00040 8 3138173 3144621 PCT