Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03429 ATGGCCAGCGATCCCAGGCAGAACGAAACCCAAGTGGCGCTAATTCTCGGCCCGGATTCCACTCATCTCGAATCCCTAATTTCACACTTGATGTCCTCCTCCAACGACCAGCGTTCTCAGGCTGAGTCTCTCTTCAACCTCTGCAAGCAGACCCGCCCGGAATCCCTCCTCCTTGGCCTGGCCCACCTCCTCCACACCGCCCCCAAACCGGAGACCCGAACCATGTCCGCTATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACTCTTTCCTCTGGCCACTCCTCTCCCCTGCCGCCCGCTCCTCCCTCCACTCCGTCCTCCTCTCCTCGCTCCAACAAGAGCCCATCAAATCCATCTCCAAGAAGCTCTGCGACACCATCTCTGAACTTGCCGCTGCAATTCTCCCCGACGACCCCTCCGCCTGGCCCAACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCTCCCGAACCCAGGCTCCAGGAAGTCTCCCTCCTGATATTCGCCCAATTAGCGCACTACATCGGTCAAACCCTACTTCCTCAATTGTCCACTCTCCACTCTGTCTTCCTCCGCTGTCTCCACTCTTCCACCCCCTCCGACGTCCGCATCGCTGCCCTCGCCGCCTCCATCAACTTCATCCAGTGCCTCACTAGTTCCTCTGACCGCGACCGCTTCCAGGACCTCCTTCCTCTCATGATGCAGACGCTCACCGAGGCACTGAATTCCGGCCAGGAGGCCGTCGCGCAGGAGGCGCTCGAACTCCTCATCGAGCTCGCTGGTACCGAGCCGCGGTTCCTCCGGCGCCAGATTGTCGACGTCGTGGGCTCCATGCTGCAAGTTGCGGAAGCCGAGGCCTTGGAGGAAGGGACGCGGCACTTGGCGATTGAGTTTGTTGTAACTCTCGCCGAGGCCAGGGAACGCGCCCCTGGGATGATGAGGAAGTTGCCGCAGTTTGTGAGGAAGCTTTTTGGCGTTTCGCTGAATTTGGTCCTGGATATTGAGGATGATCCTGCATGGCACGCTGCAGTGGACGAGGAAGAGGATGCTGGTGAGACCAGTAACTATGCGTTTGGGCAGGAATGTTTGGATAGGCTTTCGATTGCGCTGGGCGGGAACACCATAGTGCCTGTTGCTTCTGAGTTGTTGCCCACTTACTTGTCTGCTCCTGAGTGGGAAAAGCACCATGCTGCACTCATTGCGCTTGCGCAGATTGCTGAGGGTTGTTCGAAGGTATCATCACTTGCTTTGCTATTTTTGCTATTAACTGGGTATTGTGATTGTGATTTTGGCCTTTTCTTGCTTTTATGTTTGGACCTGTGTTTTGTATGCTGTGTGGATGAATTTCATAGGTTTGCTGCATCTGTGTTTGTTCTCATGCTTTTATGTTGTGCTTTTTGTGTTAAACCTTTGTGTACGGTAATGATAAAGAATCTGGAACAGGTGTTATCAATGATTTTAAATTCATTTCGTGATCCCCATCCTCGAGTGCGATGGGCAGCTATAAATGCAATTGGGCAGTTGTCCACGGATTTGGGGCCAGATTTGCAGGTTAAATTTCACCACTTAGTTCTTCCGGCTTTGGCTGGTGCGATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCTGTGCTAAATTTCACTGAGAATTGTACCCCTGATATTCTAACACCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCTTGCAGAATGGCAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCCTTAGCATCGGTTGCAGATTCTTCACAGGAGCAATTTCAAAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTGGTTAATGCAAATGATAAATCTAATCGGATGCTTCGAGCCAAAGCTATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGGAAGGAGAAGTTCAGGGACGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAGCAGTCTCAACTGGATGCTGATGATCCAACTGCTAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGACAAGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTCTGATCCAGTCTGCGCAACTTAAGCCTGATGTGACCATTACATCTGCAGATTCTGATACTGAATTTGACGAAGATGATGATAGCGATACTTGTCTAGAGCAGGGTGGGATGGTGGTGAGGCTTGTGATGTGTTTTGGAGTTGAAGTTGGGTGGCCACGTTTGGGCTTCTGGGGTGTTTTGTTGCATTGTTTATTTGAAGCCCTACTAAAAACTGCTGTTCTTGACCTCCATTTTTCTGCTGTCAACCTTCCATTTTTTGTCAACTTATGGGTCGTGGGTCCCTCGGGTTTCATGATTTACATCGAAACAATTACACTTGGGGATAAAAGGATAGGCATTAAGACCAGTGTCTTGGAGGAGAAGGCTACTGCTTGTAACATGCTATGTTGCTATGCTGACGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCACTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCCATGCCAGAACTGTTATCCTCAGCGAAATCAGCTGTAGAGAAGGGACAATCACAAGGTCGGGATGAGACTTACATAAAGCAGTTGTCTGATTATATAATACCAAGTTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTCTCTGGACCACATCTAGATGAAAAACAAGTACGGAGTATTGTTGATGAGATTAAACAAGTCCTTACAGCCAGTTCAACAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCAAGGAAGAAAATGAGCAAGAAGAGGATCTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGACATCCTTCTTGCCGTTCTTTGATGAGCTGTCCTCATACATAACACCTATGTTTGGCAAAGATAAAACCTCAGAGGAAAGGAGAATTGCCATCTGTATATTTGACGATGTTGCTGAGCACTGTCGGGAAACCGCTCTCAAATATTATGATTCTTTCCTTCCATTCTTACTAGAAGCTTGCAATGATGAATATCCAGATGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTCTCAAGGTTAGATACTGTGATAAGGCATCCAAATGCACAACTTCCTGATAACGTAATGGCATATGACAACGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTTCACCGTGATAGCATAAATGCAACCCAGGTTGTTCCTGCCTGGCTGAGTTGCTTGCCTATAAAAGGTGATTTAATCGAGGCTAAGGTTGTGCACGACCAACTTTGTTCAATGGTTGAAAGATCAGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATTGTCGCAGTTTTTGCTGAGGTTTTATGTGCGGGAACTGATCTGGCAACTGAACAAACTGTAAGTCGGATGATTAATCTATTGAGGCAGCTACAACAGACTTTGCCACCTTCAACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAGCAACTTGCACTTCAGTCCATCCTCTCATCCTAA 3756 0.4787 MASDPRQNETQVALILGPDSTHLESLISHLMSSSNDQRSQAESLFNLCKQTRPESLLLGLAHLLHTAPKPETRTMSAILLRRHLTRHHDSFLWPLLSPAARSSLHSVLLSSLQQEPIKSISKKLCDTISELAAAILPDDPSAWPNLLPLLFQWVTSPEPRLQEVSLLIFAQLAHYIGQTLLPQLSTLHSVFLRCLHSSTPSDVRIAALAASINFIQCLTSSSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAEALEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVSLNLVLDIEDDPAWHAAVDEEEDAGETSNYAFGQECLDRLSIALGGNTIVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSKVSSLALLFLLLTGYCDCDFGLFLLLCLDLCFVCCVDEFHRFAASVFVLMLLCCAFCVKPLCTVMIKNLEQVLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLIQSAQLKPDVTITSADSDTEFDEDDDSDTCLEQGGMVVRLVMCFGVEVGWPRLGFWGVLLHCLFEALLKTAVLDLHFSAVNLPFFVNLWVVGPSGFMIYIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYIKQLSDYIIPSLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVLTASSTRKHERAERAKEEDFDAEERELLKEENEQEEDLFDQVGDCLGTLIKTFRTSFLPFFDELSSYITPMFGKDKTSEERRIAICIFDDVAEHCRETALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDTVIRHPNAQLPDNVMAYDNAVSALGKICQFHRDSINATQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEVLCAGTDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03429 1251 ProSiteProfiles HEAT repeat profile. 483 521 IPR021133 -
Vimu6g03429 1251 SUPERFAMILY ARM repeat 823 1226 IPR016024 -
Vimu6g03429 1251 PANTHER IMPORTIN BETA 463 1223 IPR040122 GO:0006606
Vimu6g03429 1251 Gene3D - 19 420 IPR011989 -
Vimu6g03429 1251 Gene3D - 458 733 IPR011989 -
Vimu6g03429 1251 Gene3D - 799 1250 IPR011989 -
Vimu6g03429 1251 Coils Coil 966 986 - -
Vimu6g03429 1251 SMART TOG_3 442 673 IPR034085 -
Vimu6g03429 1251 Pfam HEAT repeat 1059 1087 IPR000357 GO:0005515
Vimu6g03429 1251 Pfam HEAT repeat 483 510 IPR000357 GO:0005515
Vimu6g03429 1251 Pfam Importin repeat 6 920 1024 IPR041389 -
Vimu6g03429 1251 Pfam Importin repeat 287 378 IPR041653 -
Vimu6g03429 1251 SUPERFAMILY ARM repeat 19 960 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03429 Vimu-Chr6 31079561 31089572 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03429 K20222 - ming:122089090 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03429 6 31079561 31089572 Vimu6g03429 6 31079561 31089572 ECH