Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03428 ATGAACTTTACTGTCTTAACTCCAGTATCTGGGGAATGCTTTTTTTATGGTTCAGGAAAAATTGAGAATAACAAGGACGTGTTCCATGACAGAGATATTTTTCTGGAAGGCTATAAAGAAATGAATAGGAGCTTAAAGATATATGTTTATCCTCACAGGGAAGATGATCCTTTTGCAAACGTGCTTTTGCCTCCGGAATCTGAACCTGATGGCAATTATGCGAGTGAAAGTTACCTGAAAAAGGCACTTATGAAGAGCCATTTCATTACAATTGAACCAAAAGAAGCGGATCTTTTCTTTCTGCCCTTCTCCATAGCAAGATTGCGGCATGACAGAAGAGTTGGTGTAGGAGGTATACAAGACTTTATTAGAGACTACATTCAGAACATCAGTCACAAGTATCCATACTGGAATCGCACAGGTGGTGCTGATCACTTTTATGTTGCTTGTCATTCAATTGGAAGGCCTGCCATGAACAAAGAACCTGATGTGAAATTCAATGCCATTCAAGTTGTATGCTCATCTAGTTATTTCCTTACTGGGTATATTGCTCATAAGGATACATGCCTACCGCAGATTTGGCCAAGAAAAGGAAATCCCCCAAACCTTGATTCATCAAAGAGGAAAAGGCTAGCTTTCTTTGCAGGGGGAGTTAATTCCCCAGAACGTGTAAAGCTTCTTGAGACATGGAAAAATGATTCAGAAATTTTTGTGCACCATGGAAGACTTAAAACAACATATGCAGATGAGTTGCTAGAAAGCAAGTTCTGCCTTCATGTTAATGGCATTGAAGTGAACACAGCTCGTATCGGAGACTCTCTATATTATGGTTGTGTTCCAGTGATCATTGCCAACTACTATGACCTTCCCTTCGCTGATGTGTTGAACTGGAAGAGCTTTTCGGTTGTTGTCACCACCTCAGACATCCCCTTACTCAAAAAGATCCTCAACGACATCATCAGTTCTGACAAATACTGGATGTTACAAAAGAATGTTTTGAAGGTCAGGAAACACTTCCAATGGCATTCACCCCCCCACGACTTTGATGCGTTTTACATGGTTATGTATGAATTATGGCTTAGACGAAGCTCTATAAAAGTTTCCTAG 1107 0.402 MNFTVLTPVSGECFFYGSGKIENNKDVFHDRDIFLEGYKEMNRSLKIYVYPHREDDPFANVLLPPESEPDGNYASESYLKKALMKSHFITIEPKEADLFFLPFSIARLRHDRRVGVGGIQDFIRDYIQNISHKYPYWNRTGGADHFYVACHSIGRPAMNKEPDVKFNAIQVVCSSSYFLTGYIAHKDTCLPQIWPRKGNPPNLDSSKRKRLAFFAGGVNSPERVKLLETWKNDSEIFVHHGRLKTTYADELLESKFCLHVNGIEVNTARIGDSLYYGCVPVIIANYYDLPFADVLNWKSFSVVVTTSDIPLLKKILNDIISSDKYWMLQKNVLKVRKHFQWHSPPHDFDAFYMVMYELWLRRSSIKVS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03428 368 Pfam Exostosin family 42 318 IPR040911 -
Vimu6g03428 368 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 42 357 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03428 Vimu-Chr6 31067837 31069085 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03428 - - gmx:100798319 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03428 6 31067837 31069085 Vimu6g03428 6 31067837 31069085 ECH