Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03426 ATGGGTCCCACCTTCTACCTTAAACGTCACTCATCCAATCGCGTTTATCCACGCATCCACATCAATTCGCCGCGTGTCGGCCATGATCACTCTTCCTCCGTCGATCTCCGCGTCGCGCCATCACAGCCATCAACTGAACGAGAATTCAACTTTATCCGAGGAAAATTAATGGCTGAGGTTTTGACCAAGGCGAATTTCGTTTCTTCTTTGCTCGGTAGTAGTCATCGCCACCATCGAAGGGGGACGGTTCCCGATTCTCGTAGCTTCGTTTCTGGCGTCGGAGGGTACCCTTCTCTCAAGTTAAAGTCTCAGATTCGCAGATCTTGGTCCTCTTCTGAGTTTCAGGGTAAAAAGCTTCACTTTCATGTAAATAGAGGAATACCCAACAGGGCCAGTTCGCGGTTGAGAGCTTCAACTGGTGCTCAGATGACCCATAGAATAGGGAATGTTCAGAAATGGTGGGAAAAGGGGCTTCAACCCAACATGAAAGAGGTGACTTCCGCCCAAGACCTTGTGGAATCACTGTTAAACGCAGGGGACAAGTTGGTGGTGGTTGATTTCTTCTCTCCTGGCTGTGGTGGCTGCAAAGCTCTTCATCCTAAGATATGTCAACTGGCAGAGATGAATCCTGATGTTCAATTCCTTCAGGTGAATTATGAGGAGCATAAGTCCATGTGTTATAGCCTCAATGTCCATGTTCTTCCTTTCTTCCGCTTCTATAGAGGTGCTCATGGTCGATTGTGTAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACTCCCCAGATAGATGCAGCTTGGGCCCAACCAAAGGGTTAGAGGAGAAAGAGCTCCTTGCTCTTGCTGCCAACAAAGATCTTTCGTTCACCTATTCACCAAATCCCGTACAACCTGAACATGCCGATGAAGAGTTGGTTTCTGCTTCCACTCCTGTTCCTAGTTCAGAATCTCTTCATTCATTGACTCTCATTTCTGAGGTCTCCAAAGAGAAAACCTTGACCACTGCTGGGAGATAA 1038 0.474 MGPTFYLKRHSSNRVYPRIHINSPRVGHDHSSSVDLRVAPSQPSTEREFNFIRGKLMAEVLTKANFVSSLLGSSHRHHRRGTVPDSRSFVSGVGGYPSLKLKSQIRRSWSSSEFQGKKLHFHVNRGIPNRASSRLRASTGAQMTHRIGNVQKWWEKGLQPNMKEVTSAQDLVESLLNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHSPDRCSLGPTKGLEEKELLALAANKDLSFTYSPNPVQPEHADEELVSASTPVPSSESLHSLTLISEVSKEKTLTTAGR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03426 345 FunFam Thioredoxin-like 1-2, chloroplastic 151 269 - -
Vimu6g03426 345 Gene3D Glutaredoxin 155 272 - -
Vimu6g03426 345 MobiDBLite consensus disorder prediction 299 325 - -
Vimu6g03426 345 ProSiteProfiles Thioredoxin domain profile. 132 269 IPR013766 -
Vimu6g03426 345 Pfam Thioredoxin 173 244 IPR013766 -
Vimu6g03426 345 CDD TRX_family 178 242 - -
Vimu6g03426 345 SUPERFAMILY Thioredoxin-like 151 267 IPR036249 -
Vimu6g03426 345 PANTHER THIOREDOXIN, MITOCHONDRIAL 128 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03426 Vimu-Chr6 31050683 31052685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03426 - - var:108327816 495.352