Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03410 ATGTCTGCAGAACCTCCATCAACTTCGGTGGCCGTCGCAGATGGACAATCCAAGGGTGCCAGAAAACCCAAATATTCTAGATTCTCACAGCAAGAACTTCATGCCTGGCAGCCAATTCTAACACCTAGTTGGGCCATTTCAATATTTACGGTCATAGGACTCATCTTCATTCCGGTTGGTCTTGCTTCACTGTTTGCATCTGAGAGTGTGGTAGAAGTTCCATTCCGATATGATGAAGAATGTCTTCCACCCAATCGCAAAAATGACGCAGTGGCATACATTAAAGATGATACGGCAAACAAAACTTGCAATAAGAAATTGACAGTTAAGAGTAAAATGACGGCCCCTGTTTATGTCTATTATCAGCTTGATAATTTTTACCAAAACCATCGCCGATACGTTAAAAGTAGAGATGACAAACAACTAAGGAATAAAGCATCTGAGAATGATGTTGGCACGTGTAGTCCCGAAGATTATACACCAAATGAAATGGGTCATAAACCAATTGTTCCTTGTGGCCTTATTGCTTGGAGTATGTTTAATGACACGTACAAACTTTCAAGCAACAATAAGGAATTGGTGATTAACAAAAAGAATATAGCATGGAAGAGTGACCAAGATGGGAAATTCGGGTCTGATGTTTATCCAAAGAATTTTCAAGCTGGAGACATGTACCAGTTGAGTGAGCAAGAGGATCTCATTGTTTGGATGAGAACAGCAGCACTACCTACTTTCAGAAAACTATATGGAAAGATTGAGACTGACATAGACGATAATGCAGAAGTGATGCTTGTAATAGAGAACAATTATAATACATACGAGTTTGGAGCCAGAAAGAGCATAGTTCTTTCAACCACCGCTTGGGTTGGTGGAAGAAACCACTTCTTGGGGATGGCATATATTCTCATTGGTGGGATTTCCCTGTTACTGGCTGTGGGTTTCCTACTTCTATATGTGATGCAACCAAGGTGA 972 0.4064 MSAEPPSTSVAVADGQSKGARKPKYSRFSQQELHAWQPILTPSWAISIFTVIGLIFIPVGLASLFASESVVEVPFRYDEECLPPNRKNDAVAYIKDDTANKTCNKKLTVKSKMTAPVYVYYQLDNFYQNHRRYVKSRDDKQLRNKASENDVGTCSPEDYTPNEMGHKPIVPCGLIAWSMFNDTYKLSSNNKELVINKKNIAWKSDQDGKFGSDVYPKNFQAGDMYQLSEQEDLIVWMRTAALPTFRKLYGKIETDIDDNAEVMLVIENNYNTYEFGARKSIVLSTTAWVGGRNHFLGMAYILIGGISLLLAVGFLLLYVMQPR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03410 323 PIRSF Lem3/Cdc50 3 323 IPR005045 GO:0016020
Vimu6g03410 323 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 64 323 IPR005045 GO:0016020
Vimu6g03410 323 PANTHER CELL CYCLE CONTROL PROTEIN 50 19 323 IPR005045 GO:0016020
Vimu6g03410 323 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03410 Vimu-Chr6 30824083 30826635 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03410 K26935 - gmx:100779539 571.237