Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu6g03409 | ATGGAAATTCCCAAGCATGCACATGCCAATAGGTCTTATGAAGATTTTGATCCTTTGTTTATGTGGCGTAGAGAAGAGGGTCGTGACACCCTTGAACTTCATCTTCCAGGCATGTTCCATTGCATTTCTCCATGTTTCAAGAGAGACCAAATACGAATTCAGATAAACCATGTTGGTTTGCTGGTAATATCTGGGGAGCGTCCTTCGGAAGGAAACAGATGGAAGCGTTTCAAGAAAGAGTTCGAAATCCCATCATACTGCAACGACGATGCAATCCATGGCAATATGATGCAGAGCATTCTTTCAGTGGTGATGCCAAAGAAAAGCTCTCAGATTCTTCAAGAGGAGCAAGAAATGAAGGAAGAGAAAAGGGGAAACAAGAGAAAAGGAGAGAGTGAAATATCAGAAGAAAATGATATGAAAGATGATGCAGAGTACCATTTTGAAGAAGATGATGAAAGGGTTCCGCAGGAAACAACAAGAGATGTTGCCCTAAAGTTCATGCTTGTCATGGTTCTGATATTGGTTGCAGCAAGTTACATATCAGATGTAAGCAAAAGCCTCATGGCTCAAGCTGCTTCGTATTTTCACAACTAG | 597 | 0.4137 | MEIPKHAHANRSYEDFDPLFMWRREEGRDTLELHLPGMFHCISPCFKRDQIRIQINHVGLLVISGERPSEGNRWKRFKKEFEIPSYCNDDAIHGNMMQSILSVVMPKKSSQILQEEQEMKEEKRGNKRKGESEISEENDMKDDAEYHFEEDDERVPQETTRDVALKFMLVMVLILVAASYISDVSKSLMAQAASYFHN | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu6g03409 | 198 | Gene3D | - | 1 | 116 | IPR008978 | - | |
| Vimu6g03409 | 198 | Coils | Coil | 113 | 133 | - | - | |
| Vimu6g03409 | 198 | SUPERFAMILY | HSP20-like chaperones | 13 | 110 | IPR008978 | - | |
| Vimu6g03409 | 198 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 11 | 122 | IPR002068 | - | |
| Vimu6g03409 | 198 | PANTHER | HEAT SHOCK PROTEIN 26 | 12 | 157 | - | - | |
| Vimu6g03409 | 198 | Pfam | Hsp20/alpha crystallin family | 44 | 116 | IPR002068 | - | |
| Vimu6g03409 | 198 | CDD | ACD_sHsps-like | 30 | 107 | - | - | |
| Vimu6g03409 | 198 | MobiDBLite | consensus disorder prediction | 115 | 157 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu6g03409 | - | - | pvu:PHAVU_001G113500g | 320.857 |