Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03405 ATGGCTTCTTTTTCAGCTAGTCTTGCCTTCTTCGCCATCTCCATGGTTCTGCTTTCCTCGGTTGCTTTGGCTACTGATTTTGTTGTGGGTGATGACAAGGGTTGGACTCTTGATTTTAACTACACAGTTTGGGCACAAGACAAGGTTTTCCGTGTCGGTGACAACCTTTATGAAGATGCTCTTATGGCAGTGTTCAACTATGACAACTCGAAGCACAACGTGGTGAAAGTGAACCAAACAGAGTTCCACGATTGCAGTTCCACGGCAGCGAACGATGTATACCAAAGCGGAAAGGACGGCATCACGCTGAAATCAGAAGGGAGGAAGTGGTACATTTGCAGCAAAGGCAACCACTGCAGCAATCATCAAATGAAGCTCGTCATCAACGTCGAGTCTGCAGCTCCGGCACCGGCTCCCACTTCCTCCGCTCCTTCTCTTGTCGCTTCTCTCTCTGCTGGGGCCCTCATCGTTGCCGGAGCAGCAATCCTTGCCTGA 495 0.501 MASFSASLAFFAISMVLLSSVALATDFVVGDDKGWTLDFNYTVWAQDKVFRVGDNLYEDALMAVFNYDNSKHNVVKVNQTEFHDCSSTAANDVYQSGKDGITLKSEGRKWYICSKGNHCSNHQMKLVINVESAAPAPAPTSSAPSLVASLSAGALIVAGAAILA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03405 164 PANTHER BLUE COPPER PROTEIN 22 138 IPR039391 GO:0009055
Vimu6g03405 164 CDD Phytocyanin 25 130 - -
Vimu6g03405 164 Gene3D - 23 135 IPR008972 -
Vimu6g03405 164 ProSiteProfiles Phytocyanin domain profile. 25 132 IPR003245 GO:0009055
Vimu6g03405 164 FunFam Cupredoxin superfamily protein 23 135 - -
Vimu6g03405 164 SUPERFAMILY Cupredoxins 24 130 IPR008972 -
Vimu6g03405 164 Pfam Plastocyanin-like domain 35 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03405 Vimu-Chr6 30755349 30756050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03405 18 152 Miscellaneous Gene Families AT2G32300 35.556 4.42e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03405 - - vum:124834848 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03405 6 30755349 30756050 Vimu6g03405 6 30755349 30756050 ECH