Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03387 ATGGAAGGAAGTTTGGTGGATAACGGTGGAGAGAGAGTTGGACGTGGGAACAAGGTTGGTTATGTGAAAAGAGGCATTGGCAAAAAGAGGAAACAGATTCTTCGCAGGGTTAGGAGGTCCGACATGACTGTTTCAAACACACTTCAGCAGCTGTTTCATTCATGCACAGAAGCTTTCAAAGGTCCTGACACTGTTCCTTCTCCACAAGATGTTCAGAGATTGCGTCAGATACTTGATAACATGAAACCAGAAGATGTTGGGCTAAATAAAGATCTACAGTTCTTCAAGCCTGGAATTGCAGTGAGAGAGAATCAAAGGGTCACTTACACAACCGTGTACAAGTGTTACAAATTCTCACTCTGCATCTTTTTCATACCTGAAGGAGGAATCATTCCTCTCCATAACCACCCAGGCATGACTGTTTTCAGCAAGCTTCTGTTAGGACTAATGCACATCAAGTCCTATGATTGGGTTGACCCAGAGGTCTCTAATGACAACCTCATGCAACAACCATCTCAATTGAGAATGGCAAAGTTGAAAGCTGATAAGGTGTTCACATCATCTTGTGACACTTCTGTGCTGTATCCAACCACGGGAGGTAACATCCATGAATTCAAAGCCATAACCCCTTGTGCTGTTCTTGATGTCATTGGCCCACCTTATTCCAAAGAAGATGGCCGTGACTGTTCCTACTACAAAGATCATCCTTGTACTGTTTTCCCAAAAGAAAGGATTGGTGAAGAGAAAGAAGAAAAGGACAAGGATAGTTACGCATGGTTGGAAGAAATTGAAATGCCAGAGAACTCAGAAATGGATGGCATAGAGTACCTGGGTCCAACACCCTTTTAG 849 0.4323 MEGSLVDNGGERVGRGNKVGYVKRGIGKKRKQILRRVRRSDMTVSNTLQQLFHSCTEAFKGPDTVPSPQDVQRLRQILDNMKPEDVGLNKDLQFFKPGIAVRENQRVTYTTVYKCYKFSLCIFFIPEGGIIPLHNHPGMTVFSKLLLGLMHIKSYDWVDPEVSNDNLMQQPSQLRMAKLKADKVFTSSCDTSVLYPTTGGNIHEFKAITPCAVLDVIGPPYSKEDGRDCSYYKDHPCTVFPKERIGEEKEEKDKDSYAWLEEIEMPENSEMDGIEYLGPTPF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03387 282 Gene3D Jelly Rolls 37 254 IPR014710 -
Vimu6g03387 282 CDD cupin_ADO 118 222 - -
Vimu6g03387 282 PANTHER UNCHARACTERIZED 48 280 IPR012864 GO:0016702
Vimu6g03387 282 SUPERFAMILY RmlC-like cupins 43 238 IPR011051 -
Vimu6g03387 282 Pfam PCO_ADO 77 280 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03387 Vimu-Chr6 30515640 30517613 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03387 K23953 - gmx:100805411 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03387 6 30515640 30517613 Vimu6g03387 6 30515640 30517613 ECH