Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03381 ATGGGGACTCTAACGAGTTGCAGTTTCATGCCTCTGAACTCGGAGTTCCGCTCCAACCCGGTTCGCCGTGCCTTCAGGGAGAGGATTCAGTGCCACAAACTCACGCGCCTGAGGGGCACCTCTTGCTTCTTCTCACGCGCGCGAGTACCCAAATGGGGCAAGTTCAAGCACGCCAATTCGGGCATCCGTATGTGCTTTGGTACTAATGACAGCGACAGTGACAAGGACAACGTTGGTGCTGTAGAAGAAAGTGGTGGCGATGAATCCAAATCCAACGTTACAACGACGATGCCTGAAGAAGAGAGAGGATTCAGTTCGGAGAAATCAGCGCCTCCTTCTACTTCTCATAGGTCATCTTTGTCGTCGCTTGGACCAGCATACAACACTTTTCAAGTTGATTCTTTCAAACTTATTGAGCTTCTTGGGCCTGAGAAGGTTGATCCTGTTGATGTAAAGCTGATTAAGGATAAGCTTTTTGGGTATTCAACTTTTTGGGTGACGAAAGAGGAACCTTTCGGAGACTTGGGGGAAGGCATTCTTTTCCTCGGGAATTTAAGGGGGAATAGAGAAGATGTTTTTGCAAAACTCCAGAATCAGCTAGTTGAGGTCACAGGTGATAAATACAACCTTTTTATGGTGGAGGAACCCAATTCAGAGAGTCCTGATCCGCGTGGTGGGCCGCGTGTTAGCTTTGGTTTGTTGAGGAAGGAAGTTTCTGATCCGGGGCCAACAACGCTTTGGCAATATGTCATTGCATTGTTGTTGTTTCTCCTAACTATTGGTTCCTCAGTGGAGCTAGGTATTGCATCTCAGATCAACAGACTTCCCCCAGAAATTGTGAAATATTTTACAGATCCAGATGTGGTTGAAGCTCCAGATATGGAGCTGCTATTTCCATTTGTTGACTCAGCTTTACCTTTAGCATATGGTGTCTTGGGGGTTCTTCTCTTTCATGAGGTTGGGCACTTTCTAGCAGCATTTCCTAAACAAGTCAAATTAAGCATTCCTTTCTTCATTCCAAATATCACACTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCCATCCTTCCTGATAGAAGTACAAAAGTAGACATATCACTTGCGGGTCCCTTTGCTGGTGCTGTATTGTCGTTTTCAATGTTTGCTGTTGGCCTTCTTCTCTCATCGAATCCAGATACAGCAGGAGATTTAGTGCAAGTTCCTAGCTTGTTGTTTCAAGGTTCCTTGCTTCTTGGATTGATCAGTAGAGCAACGCTTGGTTATGCAGCGATGCATGCTGCAACAGTTCCTATTCATCCTCTTGTGATTGCTGGCTGGTGTGGCTTAACTATACAAGCTTTTAACATGCTTCCAGTGGGATGCCTTGATGGTGGAAGAGCAATACAGGGTGCTTTTGGAAAAAATGCGCTAGTTGGCTTTGGTTTAACCACTTATACATTGCTTGGACTAGGAGTGCTTGGTGGACCTCTTTCACTTCCTTGGGGGCTTTATGTTTTGTTATGTCAGAGGGCACCGGAGAAACCATGCTTGAATGATGTGACAGAAGCTGGGACATGGAGAAAGGCACTTGTAGCAGTTGCTATTTTTCTTGTTGTCTTGACTCTTGTTCCTGTTGGAGATGAGCTTGCAGAAGAACTTGGTATAGGTCTTGTAACTGCATTTTGA 1668 0.4526 MGTLTSCSFMPLNSEFRSNPVRRAFRERIQCHKLTRLRGTSCFFSRARVPKWGKFKHANSGIRMCFGTNDSDSDKDNVGAVEESGGDESKSNVTTTMPEEERGFSSEKSAPPSTSHRSSLSSLGPAYNTFQVDSFKLIELLGPEKVDPVDVKLIKDKLFGYSTFWVTKEEPFGDLGEGILFLGNLRGNREDVFAKLQNQLVEVTGDKYNLFMVEEPNSESPDPRGGPRVSFGLLRKEVSDPGPTTLWQYVIALLLFLLTIGSSVELGIASQINRLPPEIVKYFTDPDVVEAPDMELLFPFVDSALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPNITLGSFGAITQFKSILPDRSTKVDISLAGPFAGAVLSFSMFAVGLLLSSNPDTAGDLVQVPSLLFQGSLLLGLISRATLGYAAMHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRAIQGAFGKNALVGFGLTTYTLLGLGVLGGPLSLPWGLYVLLCQRAPEKPCLNDVTEAGTWRKALVAVAIFLVVLTLVPVGDELAEELGIGLVTAF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03381 555 CDD S2P-M50_like_2 253 476 - -
Vimu6g03381 555 MobiDBLite consensus disorder prediction 73 121 - -
Vimu6g03381 555 MobiDBLite consensus disorder prediction 107 121 - -
Vimu6g03381 555 PANTHER ZINC METALLOPROTEASE EGY1 64 549 IPR044838 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03381 Vimu-Chr6 30417416 30426654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03381 K25380 - gmx:100808073 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03381 6 30417416 30426654 Vimu6g03381 6 30417416 30426654 ECH