Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03379 ATGTATCTACCCCGCCACATCTTCACCAAACTCTCTCCGCACCGCCGCCACTTCTCCCAATCCGCGGCCGCTGCCGTCCTCCACCCGCCGGAGCCGGAGCCGCTCACCTACCTCGACGGCTTTCCTCGCCCGGATCCCAAGCACGATGAGACGATCTTCGCTGTTCCCCGCGCGGACTCCGGCAAGAACATTTCCGAGAAGGAGCGACGCGTCGGGCGCTTGCCGAGCATCATCTTTGAACAGGAAGATGGCCAGCACGGCGGCAACAAACGCCTCATCTCCGTCCGCACCGACCAGATCAGAAAACTCGTCAACCACCTCGGTCGGTCCTTCTTCCTCTCCCGCCTCTTTCACCTAGAAGTCCGCGCGCAGTTCGACTCTGATGACGTCGTTGAGAGCGTTCGCGTCTTGCCTCGCCATATTCATTTGAAAGCTGGCACAGACGCGCCGTTGAATGTGACCTTTATAAGGGCTCCGTCGCGCGCCTTGTTGAAAGTTAATGTTCCTCTCGTCTTCATAGGAGATGATGTATCACCTGGACTCAAGAAAGGTGCTTATTTGAATACCATCAAAAGGACTGTTAAGTTCTTGTGCCCTGCAGACATTATTCCCCCATATATTGACGTCGATTTAAGTGAGTTGGATGTGGGCCAGAAAATAGTAATGGGAGATCTCAAAGTTCACCCTGCTTTAAAACTTCTTCAGTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGAGTTTCTGAAATACAAAAGAAATCTAAGTAA 774 0.5207 MYLPRHIFTKLSPHRRHFSQSAAAAVLHPPEPEPLTYLDGFPRPDPKHDETIFAVPRADSGKNISEKERRVGRLPSIIFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLEVRAQFDSDDVVESVRVLPRHIHLKAGTDAPLNVTFIRAPSRALLKVNVPLVFIGDDVSPGLKKGAYLNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKIVMGDLKVHPALKLLQSKDEAVCKIMGQRVSEIQKKSK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03379 257 SUPERFAMILY Ribosomal protein L25-like 51 251 IPR011035 GO:0006412
Vimu6g03379 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 26 253 - -
Vimu6g03379 257 Gene3D Ribosomal Protein L25; Chain P 49 158 IPR020056 -
Vimu6g03379 257 Pfam Ribosomal L25p family 54 155 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vimu6g03379 257 FunFam 50S ribosomal protein L25 163 253 - -
Vimu6g03379 257 Gene3D Ribosomal protein L25, beta domain 163 253 IPR037121 -
Vimu6g03379 257 Pfam Ribosomal protein TL5, C-terminal domain 164 246 IPR020057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03379 Vimu-Chr6 30397207 30399846 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03379 K02897 - gmx:100809143 446.817