Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03306 ATGTCTTCAAGATCGTTGAGGAGAAGACTCCATCATGGAGATGTCGATGGCAAAAGGAAGGAGCATTTTGATTCTTCGGGATTAGATTCTTTGAGTGAGCCCTTGCTGGCAGATGATGATTATACTGAGAATAAGAAGATATGTACTCTTGAAGATCTATGGGATGACGAGAGGAAGAGGGCGCAGTTTCATTGGACATTCATATTCTCAAACATCATTGCGCAATGGGCTCAGTGGTTAGGTGTGTGGTGGATGATTGTTTTGGACCTTTCAGATGCAATCAAGCTTGATACAAATGTTGTACTAGGATCTGGATCTATTATTGGACGTCTTTTGTCTTTCCCTTATTCTGCCTTAAATTTGCCAAACAATAGGATTCTTCCTCCATCACTAAGCCCTCTGCAGGAAGAAAGAGTGCGACTCCTACGCCAACGGCTTGAAGTTCCTTTTGATGGTTCTAAGGCTGAGCACCAAGATGCACTTAAACAACTGTGGAAATTAGCTTACCCTAACAGGGAGCTTCCTTCACTTAAATCAGAACTTTGGAAGGAAATGGGATGGCAAGGTTCAGACCCTTCAACGGATTTTAGGGGCGGAGGATTTATTTCATTAGAGAATCTCATCTTCTTCGCAAAGACATATCCAGATTCATTCCAGCGATTATTGAATAAACAAGATGGAATCAGAGCAGACTGGGAATATCCGTTTGCTGTAGCTGGAATCAACATTTCTTTTATGTTGGCTAAAATGCTGGATCTTCAAGCAGGGAATCCAACTTCTTTGTCCGGAATCTGTTTTCTCAAATTGCTTGAAGAGGATGAAATGGCATTTGATAACCTTTTTTGTGTTGCTTTTCAAATGATGGATGCTCAGTGGCTAGCGAAGCGGGCGACATATATGGAATTTAATGATGTTTTGAAGTGCACCAGAGCGCAATTAGAGCGCGAGCTTACTTTGGAAGACATCTCCAGCATTAAAGATTTACCTGCTTACAGCATGTTGAGATGA 1008 0.4167 MSSRSLRRRLHHGDVDGKRKEHFDSSGLDSLSEPLLADDDYTENKKICTLEDLWDDERKRAQFHWTFIFSNIIAQWAQWLGVWWMIVLDLSDAIKLDTNVVLGSGSIIGRLLSFPYSALNLPNNRILPPSLSPLQEERVRLLRQRLEVPFDGSKAEHQDALKQLWKLAYPNRELPSLKSELWKEMGWQGSDPSTDFRGGGFISLENLIFFAKTYPDSFQRLLNKQDGIRADWEYPFAVAGINISFMLAKMLDLQAGNPTSLSGICFLKLLEEDEMAFDNLFCVAFQMMDAQWLAKRATYMEFNDVLKCTRAQLERELTLEDISSIKDLPAYSMLR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03306 335 MobiDBLite consensus disorder prediction 7 27 - -
Vimu6g03306 335 ProSiteProfiles ELMO domain profile. 156 317 IPR006816 -
Vimu6g03306 335 MobiDBLite consensus disorder prediction 1 28 - -
Vimu6g03306 335 Pfam ELMO/CED-12 family 141 306 IPR006816 -
Vimu6g03306 335 PANTHER ENGULFMENT AND CELL MOTILITY 29 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03306 Vimu-Chr6 29597204 29603308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03306 K23538 - gmx:100799350 560.451