Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03305 ATGAGTGACGACATATTTGACGGACAGTTGCTTGCTGAGAAATTGTCGAAAGTCAGCAATACACAACAAAGCATTCAATATTTGTATTGCTATCTGTATTTCTTAAGCAATAATTCAGCCTTGTCCCGATGGTGTATTTCTCACCAGAAGAGAGCAAAAGAAATAGTTGAAACTTGGGTTAAATTATTCAATGCTTCCCAGAAAGATCAGCGTATTGCTTATCTACACTTGGCTAATGACATATTGCAAAATAGTAGACGAAAGGGTAGTGAGTTTGTCAACGAATTCTGGAAAGTTCTTCCAGAAGCTCTAAGGCGTGTATGTGAAAGTAATGATGACTCTGGCAAGAAAGCAGTAATCAGACTAGTTGAAGTATGGGAGGAAAGGAAGGTTTTTGGTTCACGACTTCAAGGGCTTAAGGATGAAATAATAATAATGGGTAAGGTTCCCCCTCCATCTACAAGCAATGGAAAGATTTCAAATTCTATCAAGATAGCGAAGAGGGATGGCCACGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAGAAAATACTTTCTGCCTTTCAGCCTGTTCTTGATGAACATCTTAATGAGGAAGCTGCTTTAAAAAACTGCAGTGCTGCTGTTCATGGTGTGGATAAAGTTGTGGAAGATGTTGAAAATACATTGTCTCAAGGAAACCAGCTAGGATCCACTTTGGTGAACGATTTGCTCAATGACTTACAAGAGCAGGAAAAAAAGCTTAAGCAGTACATTGAGAAACTAGAAAAAGCTGAGGCGGCAAGGGATTCATTGCTTTCTCAGCTTAAACACGCACTTCAGGAACAAGTACAGTTGTCTCTACAAGAATCAAGGCAAGAGCTTGTTCACTCCCAGTTGCTTGTTGCACGAGGGCAGATCGAGAAAGCAGTTGGTATTAAGAAACGGCTTAACCAAGCAGCAGAAGCTGCAGATCCATCTCAGGCTGCATTCGCTCAATCAATACCATTTGCACCTTTCCAAACTACTGAAGATGATAACAAGAAAGCGAAGGAAGCAGCAGCTGCTGTTGCTGCTAAACTTGCTGCCTCTGCATCCTCTGCCCAGATGCTTACATCTGTTTTTCGTTCTTTTGTAGCTGAAGAAGCTGCCTCCTTGAATGGCAGCTTAAATTCTACAGGATTTTCATCAGGATTACCTATTTTCAACCCAGAGAAAAGACCCAAACTTGAAAAACCAACGCCTGTTCTTGATGTTAACAGTTCTGAGATGACCAGCTCTTCCTTTTATGCTGCCCCTATACAACAGCCACCACTGGCAAGTGTACCACTTGCACCGTCAGTCGGCATGCAAACCGGGTCTCAAGCCAATCAGTTACAAGCTGCATTTGCTTCAGCACCCCCTCCCCCGCCTCATTCTTCAGCAAATCAACCATCAAACCAATATGTCCAATCATCTGGTTTGATGGCTGGGGGAATTCCTTATGGATATGGACCAAATGGCCTACCACCTCCACCTCCTTTGCCTCCACATGTAGCAATGGGGTTGTCAATGCCTGGTAATCAATCGGCACAGCAGCAACAGCAGTCTTCTCCCGGGGGATATTACAGGCCACCTGGCATAGGGTTTTATGGGCAAAGTCACCCCTCCACACCACCCCCGGTACCAAGGCAGTGA 1659 0.4394 MSDDIFDGQLLAEKLSKVSNTQQSIQYLYCYLYFLSNNSALSRWCISHQKRAKEIVETWVKLFNASQKDQRIAYLHLANDILQNSRRKGSEFVNEFWKVLPEALRRVCESNDDSGKKAVIRLVEVWEERKVFGSRLQGLKDEIIIMGKVPPPSTSNGKISNSIKIAKRDGHVRIKLAVGCLPEKILSAFQPVLDEHLNEEAALKNCSAAVHGVDKVVEDVENTLSQGNQLGSTLVNDLLNDLQEQEKKLKQYIEKLEKAEAARDSLLSQLKHALQEQVQLSLQESRQELVHSQLLVARGQIEKAVGIKKRLNQAAEAADPSQAAFAQSIPFAPFQTTEDDNKKAKEAAAAVAAKLAASASSAQMLTSVFRSFVAEEAASLNGSLNSTGFSSGLPIFNPEKRPKLEKPTPVLDVNSSEMTSSSFYAAPIQQPPLASVPLAPSVGMQTGSQANQLQAAFASAPPPPPHSSANQPSNQYVQSSGLMAGGIPYGYGPNGLPPPPPLPPHVAMGLSMPGNQSAQQQQQSSPGGYYRPPGIGFYGQSHPSTPPPVPRQ 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03305 552 MobiDBLite consensus disorder prediction 457 552 - -
Vimu6g03305 552 MobiDBLite consensus disorder prediction 492 507 - -
Vimu6g03305 552 MobiDBLite consensus disorder prediction 512 528 - -
Vimu6g03305 552 ProSiteProfiles CID domain profile. 3 148 IPR006569 -
Vimu6g03305 552 Pfam CID domain 10 134 IPR006569 -
Vimu6g03305 552 Coils Coil 235 276 - -
Vimu6g03305 552 CDD CID_RPRD_like 9 143 - -
Vimu6g03305 552 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 8 549 - -
Vimu6g03305 552 SUPERFAMILY ENTH/VHS domain 38 144 IPR008942 -
Vimu6g03305 552 Gene3D - 4 144 IPR008942 -
Vimu6g03305 552 SMART 558neu5 10 144 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03305 Vimu-Chr6 29579344 29594944 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03305 K15559 - gmx:100814308 685.641