Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03288 ATGGAGGCGCAGAAGAAGAGGGTGGCTGTTTTGGTGGGTTGCAATTACCCCAACACCGCAAATGAGTTGCATGGTTGCATAAACGATGTGTTGGCAATGAAGGAGACTCTGGTGAAGCGATTTGGGTTTGATGACAGTAACATTGAGGTGCTAACTGATGCACCGAACTCTTGTAAATTGCCCACTGGTGCTAACATCAAGCAGGCACTGGCTAACATGGTTGATGGAGCTAAAGCAGGGGATGTACTATATTTTCACTACAGTGGACATGGAACCAGAATCCCTTCCAAGAAACATGGCCAAACCTTCCACCATGAGGAGGCTATTGTACCTTGTGACTTCAATCTCATCACTGATTTGGACTTCCGGCAACTGGTAAACAGGCTAGCAAAGGGTGCAAGCTTCACAATCCTCTCAGACTCATGCCACAGTGGAGGCCTCATCGACAAAGAGAAAGAGCAAATAGGTCCATCTTCATCGGTTCAGAAAGGTTCCACATCGAAAACCTGTTACACCCTTACCCACAAGACAATCCCTTATGATTCCATACAGCAACACCTCTCTTCCCTAACAAAAGTCATCACCACGGACATCGGTACCCATCTGCTAGAACTCTTCGGCTCCAGCGCAAGTTTGAGGTTCCAGACGGCGTCGCATGCTCTGTTGGAGGCGCTAGGACCCGACGAGGGGATCCTGCTGAGCGGGTGCCAGGCGGACGAGACGTCGGCGGACATGAACCCTGGCGTCGCCGGGAAAGCCTATGGGGCGTTCAGCAACGCGGTGGAGATGGTGGTGAGGGAGAAGGAGGGTGATTTGAGCAACAGAGAGGTGGTGGTGAGGGCGAGGAAGGTGCTGCAAGGTCAGGGGTTTGATCAGCATCCTTGCCTCTATTGCAGTGATGAGAACGCTGATGCTACCTTCCTGGGACATCCTCAGAAAACATAA 945 0.5132 MEAQKKRVAVLVGCNYPNTANELHGCINDVLAMKETLVKRFGFDDSNIEVLTDAPNSCKLPTGANIKQALANMVDGAKAGDVLYFHYSGHGTRIPSKKHGQTFHHEEAIVPCDFNLITDLDFRQLVNRLAKGASFTILSDSCHSGGLIDKEKEQIGPSSSVQKGSTSKTCYTLTHKTIPYDSIQQHLSSLTKVITTDIGTHLLELFGSSASLRFQTASHALLEALGPDEGILLSGCQADETSADMNPGVAGKAYGAFSNAVEMVVREKEGDLSNREVVVRARKVLQGQGFDQHPCLYCSDENADATFLGHPQKT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03288 314 PANTHER METACASPASE-4 4 302 - -
Vimu6g03288 314 Gene3D - 1 197 - -
Vimu6g03288 314 Gene3D - 205 308 - -
Vimu6g03288 314 SUPERFAMILY Caspase-like 1 116 IPR029030 -
Vimu6g03288 314 Pfam Caspase domain 6 303 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03288 Vimu-Chr6 29433430 29434525 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03288 - - gmx:100781510 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03288 6 29433430 29434525 Vimu6g03288 6 29433430 29434525 ECH