Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03286 ATGATATATGTTGTTTTTAGTCGAATATCTTCGATGGCGTCCCAAATTATCCGTGAATGGTCTGGCATCAATACGTTCGCCCCTGCTACCCAGACTAAGTTGCTTGAACTCTTGGGAAAACTTAAACAAGAGAATGTGAACTCCTTGACTATACTTGTGATGGGAAAAGGTGGTGTTGGAAAATCTTCAACTGTCAACTCCATCATTGGGGAAAGAGTGGTTTCGATCAGTCCTTTCCAGTCGGAAGGGCCACGACCTGTGATGGTGTCACGATCAAGGGCTGGTTTTACATTGAACATTATCGACACTCCTGGTCTCATTGAAGGGGGCTACATCAATGATATGGCACTTGATATAATAAAGCGTTTTCTTCTGAACAAGACCATAGATGTGTTGCTTTATGTGGATCGCTTGGATGTGTATCGAGTGGACAACTTGGATAAATTAGTTGCCAAAGCTATAACAGATAGTTTTGGCAAAGGGATATGGAACAAGGCTATAGTAGCACTCACGCATGCCCAGTTCTCTCCACCAGATGGATTGCCTTATGATGACTTCTTCTCACAAAGATCTGAGGCTCTCTTGAAGGTTCTTAGGTCAGGTGCCAGGATAAAGAAAGAAGCCTTTCAGGCTGCTTCTATGCCTGTTGTTTTAGTTGAGAACAGTGGGAGATGCAACAAAAATGACAGTGATGAAAAGGTTCTTCCAAATGGGACTGCTTGGATTCCCCATCTGGTCCAAACAATCACAGAAATCGCATTGAACAAAAGTGTGTCTATTCATGTTGATAAGAATTTGATTGAAGGGCCAAATCCGAATCAGAGAGGGAAATTGTGGATTCCACTCGTGTTTGCTCTTCAATATTTCCTTGTCATGAAGCCAATAAAAGGACTGATCGAGAGGGACATTGAAAATGAGAGAAAGCCAGCATGGGAGAGACGCGATGCCGCATTCCGGAAGAGAGATTTTTATTAG 975 0.4277 MIYVVFSRISSMASQIIREWSGINTFAPATQTKLLELLGKLKQENVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALDIIKRFLLNKTIDVLLYVDRLDVYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDDFFSQRSEALLKVLRSGARIKKEAFQAASMPVVLVENSGRCNKNDSDEKVLPNGTAWIPHLVQTITEIALNKSVSIHVDKNLIEGPNPNQRGKLWIPLVFALQYFLVMKPIKGLIERDIENERKPAWERRDAAFRKRDFY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03286 324 PIRSF Toc33/toc34 12 320 IPR005688 GO:0006886|GO:0009707|GO:0015450
Vimu6g03286 324 CDD Toc34_like 18 263 - -
Vimu6g03286 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 268 IPR027417 -
Vimu6g03286 324 Pfam AIG1 family 49 234 IPR006703 GO:0005525
Vimu6g03286 324 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 48 225 IPR045058 -
Vimu6g03286 324 FunFam Translocase of chloroplast 13 279 - -
Vimu6g03286 324 ProSiteProfiles AIG1-type G domain profile. 46 270 IPR006703 GO:0005525
Vimu6g03286 324 NCBIfam GTP-binding protein 12 320 IPR005688 GO:0006886|GO:0009707|GO:0015450
Vimu6g03286 324 Gene3D - 11 279 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03286 Vimu-Chr6 29424252 29428961 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03286 - - gmx:100782594 582.793