Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03261 ATGGGTTCATTCGAGGCCTTATGCAATGTTTCTCTGCTCCAATTGTTCATAGTGTTTTGCCTTGTCTTCCCATGCTTTGCTACTGACCTGAGAACAACTCTAGTAGTAGATGCTTCTGATGCAACTGGAAGGCCAATACCAGAGACACTTTTTGGCATATTCTTTGAGGAGATCAATCATGCTGGAGCTGGGGGATTATGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGGGGCCCTAACACTCCTTCTAATATTGATCCTTGGACAATCATTGGAAATGAATCATCAATAATCGTTGAAACTGATCGTACCTCTGTCTTTGACCGTAACAAGGTTGCACTTCGATTGGATGTGTTATGTGACAGTGAAGGTGACAACATCTGCCCAGATGAAGGTGTTGGTGTTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGAAAGACATACAAAGTGATCTTCTATGTTCGTTCAACTGAATCACTTAATCTAACAGTTTCCTTGAAAGGATCAAATGGTGTAGGGAACCTGGCTTCATCTGCAATCACGGGTACTGCTGATGATTTTTCAAACTGGACAAAGGTGGAGACTTTATTGGTTGCCAAAGCAACAGATCATAACTCAAGACTTCAATTAACGACGACCACCAAAGGTGTGATATGGTTAGACCAAGTGTCTGCTATGCCAGTGGATACATATAAGGGACATGGTTTCCGAACTGAACTTTTTGAAATGCTGTCAGCTTTGAAACCCAAATTTATCAGATTTCCAGGTGGCTGTTTCGTTGAAGGAGAATGGTTAAGAAATGCATTTCGGTGGAAGGCAACTGTTGGACCATGGGAGGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTATTGGACTGATGATGGACTTGGCTACTTTGAGTTTCTCCAACTTGCGGAGGACTTGGGTGCTTTACCAATATGGGTATTTAACAATGGTGTCAGCCACAATGATGAAGTTGATACATCTGCGGTTTTACCTCTTGTGCAAGAAGCCCTTGATGGAATTGAGTTCGCAAGAGGTGATCCCACTTCAAAATGGGGTTCTCTTAGAGCCGCTATGGGACACCCTGAGCCATTTGATCTAAGATATGTTGCTGTTGGGAATGAAGATTGTGGAAAACCGAAATATCGAGGAAACTACCTGAAATTCTATCATGCAATAAGAGCTGCTTATCCTGATATCCAAATTATCTCAAACTGTGATGGTTCTTCTCGGGCTTTAGATCATCCAGCTGATATAGCTAGCACATTTGATCGCACATCACGAAATGGTCCAAAGGCTTTTGTAAGTGAGTATGCTGTGACGGGAAAAGATGCTGGAACAGGAAGCCTTTTGGCAGCCCTAGCTGAAGCCGGGTTCCTTATTGGACTCGAAAAGAACAGTGATGTTATCGAAATGGTCAGCTATGCTCCACTTTTTGTTAATGCCAATGACAGGAGGTGGAACCCAGATGCAATTGTGTTCAACTCTTATCAGGCTTATGGAACTCCTAGCTATTGGGTGCAATTATTTTTCTCAGAGTCAAGTGGAGCAACACTTCTAAGTTCATCACTTCAATCGAATTCCTCTTCCAATTCAGTCCTTGCATCAGCAATAACATTTCAAAGTTCTGTAGATAACAAAAATTATATACGAATAAAGGTTGTGAACTTTGGCACCGGCGCAGTGAACCTGAAGATCTCCATTGATGGACTAGAACCAAATTCATTGCAGTTATCTGGATCAACGAAGACTGTGCTTACATCTGGAAATGTAATGGATGAGAACTCCTTCTCACAGCCAAAGAAGGTGGTGCCAATTAAGAGTGGACTTCAGAATGTTGGGAAGGACCTGAATGTGACAGTCCCTGCACGTTCATTCACATCATTTGATTTGCTGAAAGAATCCAGTGATCTGAAGAGGAAGGGAAGTGGTTCTTCTACGTGGTCTTCTATTTTTGAGCATTGCTCTGTTGATGCAAACTCAACCCTAATTCTGCATGATGTTACTAAAGTTTCCCCAAAAGCAATTCCTGACACTTTCCTTGGAGTATTCGTTGAGGAGATTAATCATGCTTGTGCTGGAGGACTGTGGGCAGAACTTGTTAGCAATAGAGGGTTTGAAGCTGGAGGACCGAAGAATACCTTGAATATTTATCCTTGGTCAACTATAGGAAATAAATCATTAATTTCTGTATCAATTAATTATAGCTCATGCTTTGAGCGTAATAAAGCAGCGTTACAAATGAACGTGTATTGTAATGATCACAATCCTTGTCCAAGTGGTGGGGTTGGTATTTCCAACCCTGGTTATTGGGGCATGAATATTGAGCAAGGGAAAAGGCAAGTTTCTGAAGATGGAAGATGGAGAAGGGTGGCAACAGTGGTGGAAGCAAACGCTACCAATCACTATTCAAGTCTTCAAATAACCACAAACAAAGAAGGGACTTACTTGTTTGACCAAGTCTCAGTCATGCCATTGGACACTCACATGGGTCATGGCTTCCGAAAGGATCTTTTTCAAATGGTGGCAGATTTGAAACCAAAGTTTATGAGATTTCCTGGTGGCACCTATGTTGAAGGCTATCATCTGCAAAACAAATATCAGTGGAAAGATACAATTGGACCATGGGAAGAGAGACCTGGTCACTACAATGATATCTGGAACTATTGGAGTGATGATGGAATTGGTTATTTGGAATATCTCCAACTAGCAGAGGACCTTGGTACATTGCCCATATGGGTGTTCAACGCTGGTTTTAGCCGTAATGAACAAATTAATACATCAGATTTAGCTCCTTACATACAAGATGCCCTTGACGGCATCGAGTTCGCAAGAGGCTCTCCTAAATCAAAGTGGGGTTCTGTTAGAGCTGGATTGGGACATCCTAAACCATTTGATTTGAGATATGTTGCCATTGGAAATGAAGATTGTGACTTTGCTAATTATCAAGGAAATTACATCAAGATATATGAGGCTATAAGATATGCCTACCCAGATATTAAAATAATCTCAAATTGCGATGCTTCTGGCACACCATTAAACCATCCAGCTGATTTGTTTGATTTTCATACTTACACAAACTCCAAAGACATATTTTCCAAGTCTACTCAGTTCGATCACACGTCACGATCTGGTCCAAAGGCTTTTGTGAGTGAGTATGCTGTATGGCGAGAAGATGCTGGAAATGGAAGTCTTCTAGCTGCAGTGGCTGAAGCTGCATTTCTTATTGGCCTTGAAAAGAACAGTGATATTGTAGACATGGTTGCTTATGCACCACTTTTTTCAAATATAAACGACAGGAAATGGATTCCGGATGCAATTGTGTTTGACTCTTATCAGATGTATGGAACACCCAGCTATTGGGTGCAAAAGCTTTTTGTTGAGTCTAGTGGAGCAACATTTCTTCCCTCAACACTCAACACAAATTCATCTAATCAACTAATTGCATCTTCAATTAGTTGGAAAAATTCTACAGATAACAAAAATTACATAAGAATAAAGGTAGTTAACTTCGGAACAGCCATAGAGACACTCGACATAAGCCTAAATGGGTTCCCAGAGACACAACGATTTTATTGTATAACGACAGTGCTTACATCAACCCATGTAATGGATGAGAATTCCTTCGCACAGCCTACGAAGGTGGTGCCACTAACAAGTTCGGAAGGGAATGTTGGAAGCAAGATAGAAGCAATTCTCTCACCCTATTCAATGCAAAAATTGAAAGGTGACCTGAAAAATGAAGAGGACAGAAGACAGAGCAAGAGATCAGAAAATGAAAAAGATGAGAATGGAAAGAAACTTGATACTCAGGAACTTTACAGTACTAAAAAAGACAGTAATTGCAAATGGTTTACATCAGAGATGAGAATAGATGCAATTTGGCCTTGGTTTGGTGTTATGCTCTATTCCCTCCTTATTCATTTTCTTTGGTTTCAACAATGCTTTGCTGATGGGAACTCAACATTGGTTGTAAATGCTTCCTTTGATAAGGAGAATGCAAGACGAATTCCTCAAAGTTTTCACGGAGTGTTCTTTGAGGAGATAAATCATGCTGGTGCTGGGGGACTGTGGGCAGAACTTGTAAGCAATAGAGGTTTTGAAGCTGGAGGACCAGACAACACCTTAAATATTTATCCTTGGTCAGTTATTGGAAATGAGTCATCCATTTCTGTATCAATAAACCATACCTCTTGCTTTGAGCGTAATAAAGCTGCATTACAAATGAAGGTGTATTGTGGGGGTCTCAAACCTTGCCCATATGGTGGCGTTGGTATCTCTAATCCTGGCTATTGGGGCATGAATTTTGAGCAAGGAAAGAGGCATGTTTTTGGAGATAAAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAACATACTAATCACTATTCAAGTCTTCAAATAACCACTACCAGTGAAGGGACATTCTTGTTAGACCAGGTGTCAGCTGTGCCATTGGACACTCATATGGGCCATGGCTTCAGAAATGACCTTTTTCAAATGGTAGCAGATTTGAAACCTAAATTTCTCAGATTCCCTGGTGGTACTTATGTTGAAGGTGATCACCTGCAAAACAGATATCAGTGGAAAGATACAATAGGACCATGGGAAGAGAGACCTGGACATTTCGATGATATTTGGAACTATTGGAGCGATGATGGAATTGGTTATTTTGAAAATCTCCAACTAGCAGAGGACCTTGGTGCATTGCCCATATGGGTGTTCAACGCTGGTATCAGCGTTCATGAAGAAGTTAATGCATCAGCCCTAGCTCCTTATGTGCAAGATGCCCTGGATGGCATTGAATTTGCAAGAGGCTCTCCTGAATCAAAATGGGGTTCTGTTAGAGCTGCAATGGGACATCCTAAACCATTTGACTTGAGATATGTTGCTGTTGGAAATGAAGATTGTTGGCATTTTAATTATCAAGGAAACTACCTTAAGTTTTATGAGGCTATAAGATCTGCCAACCCAGATATTCAAGTTATCTCAAATTGTGATGCTTCTAGTGCACCATTAAAGCATCCAGCTGATTTATTTGAGTTTCATATTTATACAGACTCCAATGACATGTTTTCTAAGTCCACTCGGTTCGATCACACATCACGAGCTGGTCCAAAGGCTTTTGTGAGTGAGTATGCTGTGTGGAAAGAAGATGCAGCAAATGGAAGTCTTTTGGCTGCCGTAGCTGAAGCCGCATTTCTTATTGGACTAGAGAAGAACAGTGATATTGTCCAGATGGTTTCTTATGCGCCACTTTTCTCGAACATAAATGACAGGAGATGGATTCCAGATTCAATTGTGTTTGACTCTTATAAGCTCTATGGAACTCCTAGCTACTGGGTGCAGAAACTTTTTATTGAGTCCAATGGAGCAACATTTCTTGACTCAACACTCTTTACAACTTCATCTAATAAACTTATTGCATCTGCAATTATTTGGGAAAATTCTACAGAGAAAAAAAATTACCTAAGAATAAAGGTAGTAAACTTTGGAACAGCCACAGAGAGTCTTAACATTCATATAAATGGGTTGAATTCAAATGTGCAACAATTTGGTTCTACCAAAACAGTTCTTGCATCAACTAACTTAATGGATGAGAATTCCTTCTTGGACCCCAAGAAGGCTTCAACTCTGGTTGTAGATGCTTCTGATTCATCTGGAAGGCCAATTCCTGACACTCTTTTCGGAGTATTTTTTGAGGAAATCAATCATGCTGGTGCTGGTGGATTGTGGGCAGAGCTTGTAAACAACAGAGGTTTTGAAGCTGGGGGCACAAAAAGTTCATCAAATATTGCACCCTGGACTAGAGTTGGGAAAGAACAAACCGTTTTCCTACAAACTGAACTTAGCTCTTGCTTTGAACAAAACAAGGTTGCATTGAAAATGGATGTGCTGTGTGACAATTGTGATGGTGTTGGTGTCTCTAACCCTGGTTTTTGGGGCATGAATATTGTGGAAGGGAAGAAATACAAAGTTGTGTTCTTTGTTAAATCAAATGGACCACTACAGATGACAGTATCATTTAGAGAAACTAAAGGTGGAAGGATATTAGCTTCTAGCGATATCATTGCTTCTGCATCAGAAGTCTCAAAATGGAAAAGAATGGAGACTATATTACAAGCTGGTGCATCAAGTTCCTACTCAAGAGAAACATTAAAAAATGCATTTCGGTGGAAAGCTAGTGTTGGAGCCTGGGAACAGAGACCTGGCCATTTTAACGATGTTTGGGGTTATTGGACAGATGATGGATTTGGTTTTTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAAACCACTGTGGGTATTTAACACTGGCATCAGTCATACTGATGAAATTGATACAAAGGACATCGCACCTTTTGTGCAAGAAGCCCTAGATGGTATTGAGTTTGCAATAGGTGCAGCTACTTCAAAATGGGGTTCCCTTAGGGCATCTATGGGGCACCCTCAGCCATTTGACCTAAACTATGTTGGTGTTGGAAATGAAGATTGTTACAAGAAAAACTACCAAGGCATGCTCTCACTTTCTCTTTTATTTTTATTTAGCCTTTTCGCTTGA 6591 0.4074 MGSFEALCNVSLLQLFIVFCLVFPCFATDLRTTLVVDASDATGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWTIIGNESSIIVETDRTSVFDRNKVALRLDVLCDSEGDNICPDEGVGVYNPGFWGMNIEQGKTYKVIFYVRSTESLNLTVSLKGSNGVGNLASSAITGTADDFSNWTKVETLLVAKATDHNSRLQLTTTTKGVIWLDQVSAMPVDTYKGHGFRTELFEMLSALKPKFIRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGVSHNDEVDTSAVLPLVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKPKYRGNYLKFYHAIRAAYPDIQIISNCDGSSRALDHPADIASTFDRTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVIEMVSYAPLFVNANDRRWNPDAIVFNSYQAYGTPSYWVQLFFSESSGATLLSSSLQSNSSSNSVLASAITFQSSVDNKNYIRIKVVNFGTGAVNLKISIDGLEPNSLQLSGSTKTVLTSGNVMDENSFSQPKKVVPIKSGLQNVGKDLNVTVPARSFTSFDLLKESSDLKRKGSGSSTWSSIFEHCSVDANSTLILHDVTKVSPKAIPDTFLGVFVEEINHACAGGLWAELVSNRGFEAGGPKNTLNIYPWSTIGNKSLISVSINYSSCFERNKAALQMNVYCNDHNPCPSGGVGISNPGYWGMNIEQGKRQVSEDGRWRRVATVVEANATNHYSSLQITTNKEGTYLFDQVSVMPLDTHMGHGFRKDLFQMVADLKPKFMRFPGGTYVEGYHLQNKYQWKDTIGPWEERPGHYNDIWNYWSDDGIGYLEYLQLAEDLGTLPIWVFNAGFSRNEQINTSDLAPYIQDALDGIEFARGSPKSKWGSVRAGLGHPKPFDLRYVAIGNEDCDFANYQGNYIKIYEAIRYAYPDIKIISNCDASGTPLNHPADLFDFHTYTNSKDIFSKSTQFDHTSRSGPKAFVSEYAVWREDAGNGSLLAAVAEAAFLIGLEKNSDIVDMVAYAPLFSNINDRKWIPDAIVFDSYQMYGTPSYWVQKLFVESSGATFLPSTLNTNSSNQLIASSISWKNSTDNKNYIRIKVVNFGTAIETLDISLNGFPETQRFYCITTVLTSTHVMDENSFAQPTKVVPLTSSEGNVGSKIEAILSPYSMQKLKGDLKNEEDRRQSKRSENEKDENGKKLDTQELYSTKKDSNCKWFTSEMRIDAIWPWFGVMLYSLLIHFLWFQQCFADGNSTLVVNASFDKENARRIPQSFHGVFFEEINHAGAGGLWAELVSNRGFEAGGPDNTLNIYPWSVIGNESSISVSINHTSCFERNKAALQMKVYCGGLKPCPYGGVGISNPGYWGMNFEQGKRHVFGDKKWKRVETIVEAKHTNHYSSLQITTTSEGTFLLDQVSAVPLDTHMGHGFRNDLFQMVADLKPKFLRFPGGTYVEGDHLQNRYQWKDTIGPWEERPGHFDDIWNYWSDDGIGYFENLQLAEDLGALPIWVFNAGISVHEEVNASALAPYVQDALDGIEFARGSPESKWGSVRAAMGHPKPFDLRYVAVGNEDCWHFNYQGNYLKFYEAIRSANPDIQVISNCDASSAPLKHPADLFEFHIYTDSNDMFSKSTRFDHTSRAGPKAFVSEYAVWKEDAANGSLLAAVAEAAFLIGLEKNSDIVQMVSYAPLFSNINDRRWIPDSIVFDSYKLYGTPSYWVQKLFIESNGATFLDSTLFTTSSNKLIASAIIWENSTEKKNYLRIKVVNFGTATESLNIHINGLNSNVQQFGSTKTVLASTNLMDENSFLDPKKASTLVVDASDSSGRPIPDTLFGVFFEEINHAGAGGLWAELVNNRGFEAGGTKSSSNIAPWTRVGKEQTVFLQTELSSCFEQNKVALKMDVLCDNCDGVGVSNPGFWGMNIVEGKKYKVVFFVKSNGPLQMTVSFRETKGGRILASSDIIASASEVSKWKRMETILQAGASSSYSRETLKNAFRWKASVGAWEQRPGHFNDVWGYWTDDGFGFFEGLQLAEDIGAKPLWVFNTGISHTDEIDTKDIAPFVQEALDGIEFAIGAATSKWGSLRASMGHPQPFDLNYVGVGNEDCYKKNYQGMLSLSLLFLFSLFA 2196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03261 2196 SMART alpha_l_af_c 1058 1244 IPR010720 GO:0046373|GO:0046556
Vimu6g03261 2196 SMART alpha_l_af_c 1719 1895 IPR010720 GO:0046373|GO:0046556
Vimu6g03261 2196 SMART alpha_l_af_c 443 632 IPR010720 GO:0046373|GO:0046556
Vimu6g03261 2196 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1310 1884 - -
Vimu6g03261 2196 SUPERFAMILY (Trans)glycosidases 1474 1802 IPR017853 -
Vimu6g03261 2196 Gene3D Glycosidases 1485 1797 - -
Vimu6g03261 2196 Gene3D Glycosidases 215 519 - -
Vimu6g03261 2196 Gene3D Glycosidases 820 1134 - -
Vimu6g03261 2196 Gene3D Glycosidases 2051 2185 - -
Vimu6g03261 2196 Pfam Alpha-L-arabinofuranosidase C-terminal domain 444 632 IPR010720 GO:0046373|GO:0046556
Vimu6g03261 2196 FunFam Alpha-L-arabinofuranosidase 1 519 639 - -
Vimu6g03261 2196 FunFam Alpha-L-arabinofuranosidase 1 1489 1795 - -
Vimu6g03261 2196 Gene3D - 1135 1249 IPR013780 -
Vimu6g03261 2196 FunFam Putative alpha-L-arabinofuranosidase family protein 67 227 - -
Vimu6g03261 2196 Coils Coil 1245 1265 - -
Vimu6g03261 2196 SUPERFAMILY Glycosyl hydrolase domain 509 636 - -
Vimu6g03261 2196 FunFam Alpha-L-arabinofuranosidase 1 228 519 - -
Vimu6g03261 2196 Pfam Alpha-L-arabinofuranosidase C-terminal domain 1720 1886 IPR010720 GO:0046373|GO:0046556
Vimu6g03261 2196 Pfam Alpha-L-arabinofuranosidase C-terminal domain 1059 1244 IPR010720 GO:0046373|GO:0046556
Vimu6g03261 2196 SUPERFAMILY (Trans)glycosidases 813 1149 IPR017853 -
Vimu6g03261 2196 SUPERFAMILY (Trans)glycosidases 2063 2175 IPR017853 -
Vimu6g03261 2196 Gene3D - 520 638 IPR013780 -
Vimu6g03261 2196 FunFam Alpha-L-arabinofuranosidase 1 828 1134 - -
Vimu6g03261 2196 MobiDBLite consensus disorder prediction 1250 1279 - -
Vimu6g03261 2196 SUPERFAMILY (Trans)glycosidases 210 526 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03261 Vimu-Chr6 29185378 29214858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03261 1 654 Glycoside Hydrolase AT3G10740 67.012 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03261 K01209 - gmx:100787207 1157.9