Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03258 ATGGCACTCCTCTCTTTCAATTCCCTCACACTCTCCCCTCTCCACACTTCATATCCCTCTTCTTCCTCCCTTCTCGCACTTCCCATTTCCACTGCTTTAAGAGTACACGTGGCTCAGCCCTCGAAGCCCTTCAACGGAGTTCGAATCACCACACCCAGAGGGAACAAAGGCGCGCTGATTGTCTCTGCCGCCGCAGACGGCTCTAGTTCGCCCGCGGAAGCGCTTCCTCCGGCCGCGATCGAGAAAGAAAGTGGCGTGAGTGTGGATAAGCTTCCATTGGAGTCGAAGGTCAAGGAGAGAGAGGAGCAGAAGCTGAGGATGAAACTGGCGAAGAAGATAAGGTTGCGAAGGAAAAGGCTTCTTCGGAAGCGCAAGTTGAGGAAGAAGGGTAGATGGCCACCTTCTAAGATGAAGAAATTGAAGAATGTATGA 432 0.5255 MALLSFNSLTLSPLHTSYPSSSSLLALPISTALRVHVAQPSKPFNGVRITTPRGNKGALIVSAAADGSSSPAEALPPAAIEKESGVSVDKLPLESKVKEREEQKLRMKLAKKIRLRRKRLLRKRKLRKKGRWPPSKMKKLKNV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03258 143 Coils Coil 98 118 - -
Vimu6g03258 143 PANTHER 50S RIBOSOMAL PROTEIN 5, CHLOROPLASTIC 1 143 IPR040307 -
Vimu6g03258 143 MobiDBLite consensus disorder prediction 118 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03258 Vimu-Chr6 29171038 29171552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03258 K19034 - vra:106763366 174.096