Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03255 ATGAATTTCTTGCATAGTCCTAGACACAGGTTCCTCTCACCATTTACCCTCTTCATCCAACGCCGATGGAAGAAACCCACCGTTTCCGCCCAAACCCGTTTGGAGGACAGAGTACGAGACCCCCACTTCGACAAACTCATGACTCATCTCAAAAGACTCTACCTTGTCCTCGAAATCCACCACCTCATGTCCACACGCAAGCGTGCTCCCTTCGTCTCCCTCACCCTCATGTCCCGCTGGAGAAACATCCTCGGACTCAATGTCCCTGTGGGCTCCTTCCTCCACAAATACCCTCATGTGTTCCACGTATTCGTCCACCCCTTCAGGAGGAACACGTGCTGCAGGGTCACGAAAAAGATGAAAGAGTTGATCTTGCTTGAAGGGGTGGTGGTGAGGCAGCAGGAGATGGAGGCTGTGAAGAGGGTGAAGAAGCTGCTGATGATGTCTGTGAATGGCACTCTTCGTTTGCACGCTTTGAGGATGGTCAGGAGGGAACTGGGTCTACCTGAGGATTTCAGAGATTCCATTCTTGGGAAATTCAGTGGGGATTTTAAATTGGTTGGTTTGGAGGTTGTGGAATTGGTTGACTGGGATGCAGAATTGGGATTGGCTGAGGTTGAGAAATGGAGGGAGAGAGAGTACACAGAGAAGTGGTTGAGTGAATTTGAGACCAAGTTTGCATTTCCCATTGGTTTCCCAACTGGGTTTAAGATTGAGAGAGGGTTTAGAGAGAGGTTGAAGAATTGGCAGAGGCTTTCATACACTAAGCCTTATGAACGGAAGGAGGTTGTTAGGGTGAGGACATGTGGTGGGATTGAACGGTATGAGAAGAGGGTTGTGGCTGTTCTTCATGAGCTATTGAGCTTGACTGTGGAGAAAATGGTTGAGGTTGATCAACTGGTTCATTTTCGTAGAGACCTAGGTATTGAAGTTAATGTGCGTGAATTGCTGTTAAGGCACCCTGGTATATTTTACATATCAACTAAAGGGAAGACTCTAATTGTTTTTCTTAGGGAAGCATATCGTAAAGGGGGTTTGATTGAACCGAATCCTGTGTATGAGGCACGTAGGAGTATGTTGGATCTTGTTCTATTAGGGTGTAGAAAAACCAGAAAATTGTTGGTTGGTGACGAGGCTAAGGAAGAGAGTAATGCTGTAGTCTGTGAAGTGAATGAGGAAGGTGAAAGACAAGGAGATTGGGTAATTCCTTTCTTGGAGAACTGTGAGGAGAGTAGATCCCCTTGA 1245 0.4675 MNFLHSPRHRFLSPFTLFIQRRWKKPTVSAQTRLEDRVRDPHFDKLMTHLKRLYLVLEIHHLMSTRKRAPFVSLTLMSRWRNILGLNVPVGSFLHKYPHVFHVFVHPFRRNTCCRVTKKMKELILLEGVVVRQQEMEAVKRVKKLLMMSVNGTLRLHALRMVRRELGLPEDFRDSILGKFSGDFKLVGLEVVELVDWDAELGLAEVEKWREREYTEKWLSEFETKFAFPIGFPTGFKIERGFRERLKNWQRLSYTKPYERKEVVRVRTCGGIERYEKRVVAVLHELLSLTVEKMVEVDQLVHFRRDLGIEVNVRELLLRHPGIFYISTKGKTLIVFLREAYRKGGLIEPNPVYEARRSMLDLVLLGCRKTRKLLVGDEAKEESNAVVCEVNEEGERQGDWVIPFLENCEESRSP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03255 414 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 384 IPR045040 GO:0003723
Vimu6g03255 414 Pfam Plant organelle RNA recognition domain 38 367 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03255 Vimu-Chr6 29163148 29164392 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03255 - - gmx:100789857 710.294