Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03251 ATGGGTTTGATTTCTTGTGTAACTGGGCAGTATGATCTTCTCGCTGTCGGATATGTCGCGGGAAAGCATGATGAGCCTATAGTTGAGGATGATGATGACGACGAGGAAGATGAAGACGACGATGACGAAGAGGATGATGATCATGGTGAAGGACTAGAAGGTGATGCATCTGGTAGGTCCAAGCAAACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTTGCTGGTGTCAGCCGAGTGACAGTAAAGAAGAGCAAGAATATCCTGTTTGTTATTTCAAAGCCAGACGTTTTCAAGAGTCCAACTTCTGATACATACATTATATTTGGGGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAGACTCAGGCAGCAGAGCAATTCAAGGCTCCTAATGTAAGCAATGTAGGATTGAAGCCTGAATCCTCTGCTATAGCTCAAGATGATGAGGAAGTGGATGAGGCTGGTGTAGATCCCAAGGATATAGAGCTGGTGATGACTCAAGCTGGTGTGTCAAGACCTAAAGCTGTTAAAGCACTCAAGGCAGCCGGTGGTGACATTGTTGCTGCCATTATGGAGCTAACTAATTAA 615 0.4472 MGLISCVTGQYDLLAVGYVAGKHDEPIVEDDDDDEEDEDDDDEEDDDHGEGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVAGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVSNVGLKPESSAIAQDDEEVDEAGVDPKDIELVMTQAGVSRPKAVKALKAAGGDIVAAIMELTN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03251 204 CDD NAC_NACA 77 124 - -
Vimu6g03251 204 Gene3D - 72 125 IPR038187 -
Vimu6g03251 204 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 28 203 IPR016641 GO:0005854
Vimu6g03251 204 MobiDBLite consensus disorder prediction 27 51 - -
Vimu6g03251 204 MobiDBLite consensus disorder prediction 52 72 - -
Vimu6g03251 204 FunFam Putative nascent polypeptide-associated complex subunit alpha 165 202 - -
Vimu6g03251 204 Gene3D - 165 202 - -
Vimu6g03251 204 Pfam NAC domain 66 121 IPR002715 -
Vimu6g03251 204 MobiDBLite consensus disorder prediction 22 72 - -
Vimu6g03251 204 CDD UBA_NACA_NACP1 158 203 - -
Vimu6g03251 204 SMART NAC_2 66 122 IPR002715 -
Vimu6g03251 204 PIRSF NAC_alpha 29 204 IPR016641 GO:0005854
Vimu6g03251 204 Pfam HYPK UBA domain 165 203 IPR044034 -
Vimu6g03251 204 ProSiteProfiles NAC A/B domain profile. 63 128 IPR002715 -
Vimu6g03251 204 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 73 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03251 Vimu-Chr6 29092524 29095698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03251 K03626 - gmx:100791446 297.745