Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03219 ATGGCCAAGCGCGCGCGCACTCGCGCGTGTGCACGCCTTCCCGCTGTAGATGGGCACGGTGGAGGTGGGGACGGCGCGTGGGACGTTGGAGGGTGGCCCCACCTAGAGGGAGGGCGTAACAATGATGCAGTTAGCGAAAAACAAATTGATTTCAAGTCGTTGGGAGGGGAGACAAATGAATTCTTCTTCTTCTTCTTCTCAACCCCCTCCCCTTATCCTTCTTCTGCTGTTCTTCTTGTAACTCTTCAACTTCAATCCTCTTTGTCTCTTTCACTTTTTGCTTACCTGCAACCGGCTTCAGCAGTGACTACAATTTTCCTCATGACAAAGATAAGTCCGGAAGTTGAAATCAAGATGCCAATGGAGGCATTTCCGCCAGTTTCAGCTGACGTGAGCTTTATTTACGATAGTTTTCCAAAGTACAAACTGGGAGCTGATAATCAGATTCTGGAAGAGCCAGTTGAGGAAAACCAAGGTCCTTCATTGAAGGATGTTATTGAACAAGAAGCTTCCAATTTGTCCGACCAACACAAGCGGATCTCAGTTCGGGACCTTGCCAGTAAATTTGACAAGAACTTGGCTGCAGCTGCTAAATTGTCTAATGAGGCAAAACTGAGAGACGTTGCATCTTTGGAGGGACATGTTCTCTTGAAAAAACTCAGAGATGCACTAGAATCTTTAAGAGGTCGTTTTGCAGGAAGAAACAAAGAGGATGTGGAGAAAGCTATATCTATGGTGGAAGCTTTAGCAGTTAAGTTGACTCAAAATGAAGGAGAATTGATCCAAGAGAAGTTTGAAGTGAAGAAGCTAGTAAACTTTCTCAAACAGGCTTCTGAAGATGCTAAGAAGTTAGTTAATCAAGAGAAGTCTTTTGCTTGTGCCGAAATAGAAAGCGCAAGGTCAGTGGTGCTCAGAATTGGGGAGGCTCTTGAAGAACAAGAAAAAACATCCCAAGCTTCTAAACCACAGGATGTGGATGGACTGATAGAAGAGGTTCAAGAGGCTAGAAGAATCAAACTGTTACATCAGCCAAGCAAGGTGATGGCCATGGAATATGAATTACGTGCTCTTAGGGACCAAATTCGAGAGAAGTCTATATTTTCAATTAAGCTTCAGAAAGAGCTAACCATGAGCAAGAGGGACGAGGAAAATAAATCTCGCTTATACATGTTAAATGGTTCTGAAGCTTTGGGTTCATATCTTCAAGTCCGGCCTTGCTCAGATGAAGTGCCACATGTTTCTAAATGTTCGATTCAGTGGTATCGCTTGTCATCTGAAGGGAGCTGGAGAGAAGTTATTTCAGGTGCCATCAAATCAATATATGCTCCTGACCCCTCCGATGTAGGGAGAATCTTACAAGTAGATATTGTCTCCAATGGGAAAAAACTTACACTTACAACTAATCCCGTTCAACCTGTTTCAGGACTTGGAAGCCTTGTAGAGTCACTTCTACGAAAATCTAATGCCGATTTTAATGTAGTTATTTCTCAAATGAATGGAAAAGACCACTCATCTCATTCTACTCATTCATTTAATGTGGGGAGGATGAGGATAAAGCTATGCAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAATGCAGCTATGTGGAGTTAGAAGTGATGTCAGTAACGCAGCGAAGGCATTGTTTTGGCAAGCTAGAAAAGGTCTCTCATTTGTATTAACCTTTGAATCAGAGAGAGAAAGAAATGTAGCCATCATGGTTGCCAGGAAATATGCTCTTGATTGCAATGTATGCACCCTTCTTATCTTACCTGTTACTGATTCATATGTTGACTCTCTTGTCTCATTGTTTAGACCCTACCTCTATCCAAAATGTTTGCATTTTTATTCGTACTTTGCTTCCAAATAA 1881 0.4242 MAKRARTRACARLPAVDGHGGGGDGAWDVGGWPHLEGGRNNDAVSEKQIDFKSLGGETNEFFFFFFSTPSPYPSSAVLLVTLQLQSSLSLSLFAYLQPASAVTTIFLMTKISPEVEIKMPMEAFPPVSADVSFIYDSFPKYKLGADNQILEEPVEENQGPSLKDVIEQEASNLSDQHKRISVRDLASKFDKNLAAAAKLSNEAKLRDVASLEGHVLLKKLRDALESLRGRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLVNFLKQASEDAKKLVNQEKSFACAEIESARSVVLRIGEALEEQEKTSQASKPQDVDGLIEEVQEARRIKLLHQPSKVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSRLYMLNGSEALGSYLQVRPCSDEVPHVSKCSIQWYRLSSEGSWREVISGAIKSIYAPDPSDVGRILQVDIVSNGKKLTLTTNPVQPVSGLGSLVESLLRKSNADFNVVISQMNGKDHSSHSTHSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRSDVSNAAKALFWQARKGLSFVLTFESERERNVAIMVARKYALDCNVCTLLILPVTDSYVDSLVSLFRPYLYPKCLHFYSYFASK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03219 626 Pfam Ig domain of plant-specific actin-binding protein 389 485 - -
Vimu6g03219 626 Gene3D - 208 259 - -
Vimu6g03219 626 Pfam Actin-binding domain of plant-specific actin-binding protein 162 204 IPR032012 GO:0003779
Vimu6g03219 626 Pfam Coiled-coil regions of plant-specific actin-binding protein 208 375 IPR032009 -
Vimu6g03219 626 Gene3D - 376 472 - -
Vimu6g03219 626 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 108 589 IPR039640 GO:0003779|GO:0007015|GO:0010119
Vimu6g03219 626 Gene3D - 473 594 - -
Vimu6g03219 626 Pfam PH domain of plant-specific actin-binding protein 488 589 IPR041144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03219 Vimu-Chr6 28754714 28762556 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03219 K26540 - gmx:100816432 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03219 6 28754714 28762556 Vimu6g03219 6 28754714 28762556 ECH