Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03205 ATGATAACCTTGTTGGACCTCTACCATGTTCTCACCGCGGTCGTCCCGCTCTACGTCGCCATGATCCTCGCCTATGGTTCTGTCAAGTGGTGGAAGATCTTCACCCCGGACCAATGCTCCGGCATCAACCGCTTCGTCGCCCTCTTCGCGGTGCCCCTACTCTCCTTCCACTTCATCTCCACCAACAATCCCTACGCCATGAACTACAAGTTCATAGCTGCGGATTCTCTTCAGAAAGCCATAGTCCTCGCCGTGCTCTTCGTCTGGTCCAGAACCAGCTCGAGGGGCTCTCTTGAATGGTCCATCACGCTCTTCTCCCTCTCCACGCTCCCTAACACGCTCGTCATGGGTATCCCATTGCTCAAGGGCATGTACGGGGACGCATCGGGGACCCTCATGGTCCAGATAGTGGTGCTTCAGTGTATCATCTGGTACACTCTCATGCTCTTTTTGTTTGAGTATAGGGGTGCCAAGCTTCTCATAGTGGAGCAGTTTCCCGACACTGCCGGGTCCATTATCTCGTTCAAGGTTGACTCTGATATCATATCGTTGGACGGGAAGGAACCGCTTCAGACTGAAGCCGAGGTTGGTGACGATGGCAAGCTTCATGTTACTGTCAGGAAGTCTACCAGTTCGCGCTCTGAGATCTTCTCGCGGCGCTCGCATGGTCCTAACTCGGTTTCGTTGACTCCGAGGCCTTCCAATTTAACCAATGCGGAGATTTACTCGCTTCAGTCTTCGAGGAATCCGACGCCGAGAGGGTCCAGTTTCAACCACACGGACTTCTACTCGATGGTGAATAATGGGAGGAACGTGAGTCCGAGGCAGAGTAGTTTTGGGGGGGTGCCGTTTGATGAGGAGAGTGGTGTGAGGGTTAATGGGGGTGCCGGAGCATACCCTGCACCTCACAATGCGGGGATTTTTTCTCCGGTGGGGAAGAAGAAGGGTGGTGGTGGAGAAGGTGGAGGGAAGGATCTTCACATGTTTGTTTGGAGTTCGAGTGCTTCTCCGGTGTCGGAGGGTGGGATCCATGTCTTCAGAGGTGGGGATTATGGAAATGACCAACTTCCTGTTGGTGGGGTGGCTCACCAGAAAGGTTTACTTTTTTTCCACCCCCTTTTGACTTTTGTTTTCAAAGCTTGTTTTGTTTCTATGCTTGGTGCCTGTTCAAACTGTGTGGACTTGTTTAATGTGTTTTTCCGTCATGCATCTTGCAATAACGTTACCCGAGTTGATTATGATGATTTTGGTCACGACGAATTTAGCTTTGGGAACAGAACCGTCGCCAATGGAGTGGAAAAGGAAGGGCCAGTACTTTCGAAGCTTGGCTCAAGTTCGACGGCCGAGCTTCATCCGAAAGCCCAAGGTGAATCCAAAGCTACGTCCATGCCACCAACAAGTGTTATGACAAGACTCATTCTGATTATGGTGTGGAGAAAGCTGATTAGAAACCCCAACACATATTCCAGCCTTTTTGGTCTCACTTGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCCGCTATTGTTGCTCGATCCATATCAATTTTATCTGATGCCGGCCTTGGGATGGCAATGTTCAGCCTTGGGTTATTCATGGCATTGCAACCAAAAATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTCCTCACTGGACCTGCTGTCATGGCTGTCGCTTCAATAGTGGTGGGGCTCAGGGGAGTTCTGTTGCACATAGCTATTGTACAGGCTGCTCTGCCTCAAGGAATTGTCCCTTTTGTGTTTGCTAAGGAATACAACGTTCATCCAGACATCCTTAGCACCGGGTTTGGTGATATTTGGGATGCTAATCGCTCTTCCTATCACGTTAGTTTACTACATTTTGCTTGGGCTTTGAAGGAAGGAAAGGAGTAA 1914 0.4984 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKAIVLAVLFVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGAKLLIVEQFPDTAGSIISFKVDSDIISLDGKEPLQTEAEVGDDGKLHVTVRKSTSSRSEIFSRRSHGPNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNNGRNVSPRQSSFGGVPFDEESGVRVNGGAGAYPAPHNAGIFSPVGKKKGGGGEGGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNDQLPVGGVAHQKGLLFFHPLLTFVFKACFVSMLGACSNCVDLFNVFFRHASCNNVTRVDYDDFGHDEFSFGNRTVANGVEKEGPVLSKLGSSSTAELHPKAQGESKATSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVARSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGFGDIWDANRSSYHVSLLHFAWALKEGKE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03205 637 Pfam Membrane transport protein 9 609 IPR004776 GO:0016020|GO:0055085
Vimu6g03205 637 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 611 - -
Vimu6g03205 637 NCBIfam auxin efflux carrier 1 609 IPR014024 -
Vimu6g03205 637 MobiDBLite consensus disorder prediction 213 232 - -
Vimu6g03205 637 MobiDBLite consensus disorder prediction 443 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03205 Vimu-Chr6 28517969 28522041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03205 1 609 Organic Solute Cotransporters AT1G73590 61.305 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03205 K13947 - gmx:100820506 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03205 6 28517969 28522041 Vimu6g03205 6 28517969 28522041 ECH