Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03197 ATGGGAAGTCCACATGCAACATCATCATCATCATCAACAAGGCACAGTGTTGGGAATTTACCTTCCTATCCAGCTCGGCAAATGGAGGCAAGTTTTACTTTCTGTTCCTCCAATATCTTCAGGCAAACTGAACTTGTTGCTAGAAACTACCCTCCAATGCAATCTGCAGTAGAACCATCGGAGGACTCGATCAATACACTTGTCTCGATGGGCTTTGACAGGAATAATGCCAGGCAAGCCCTAGTGCAGGCCAGAAATGATGTCAATGTGGCCACCAACATTCTATTGGAGGCACAGTCCCACTAA 306 0.4608 MGSPHATSSSSSTRHSVGNLPSYPARQMEASFTFCSSNIFRQTELVARNYPPMQSAVEPSEDSINTLVSMGFDRNNARQALVQARNDVNVATNILLEAQSH 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03197 101 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 58 98 IPR015940 -
Vimu6g03197 101 MobiDBLite consensus disorder prediction 1 20 - -
Vimu6g03197 101 Gene3D - 35 101 - -
Vimu6g03197 101 MobiDBLite consensus disorder prediction 1 22 - -
Vimu6g03197 101 SUPERFAMILY UBA-like 36 97 IPR009060 GO:0005515
Vimu6g03197 101 SMART uba_6 60 97 IPR015940 -
Vimu6g03197 101 Pfam UBA/TS-N domain 60 95 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03197 K25216 - gmx:100805217 117.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03197 6 28427284 28428381 Vimu6g03197 6 28427284 28428381 ECH