Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03194 ATGCTTTACTTCCTCATATCTTTTGTCTCCTTTCTCATCCTTTCCAAGTCCTTCACCAATAAGCCTCTCTCGTCAGGGGAGAGTGGGACCAAAATAGGGTCAACTGGGTTTTGGGGAAGCCTTTCAAGTTGGCTACTTTCTAGTCTCAGAAAAGGAAGCACAAGCACCCCTTGTAGTTTTTTTCGGTTTTCTCTTGTCCTGTCATTGAAAAATAACAGTTTAGTGTCGAAGGTGGAGAATGAGGAAGAGGAGGTGAAGGTTTCTCTCTTGGATTTGCCTGATTTACCATTGGAGTGTATCCTTGGGCACCTTTCACCTGCTGAATTATGTAGTGTGGCAGCAGTGTGCACATCTCTTAGGGATTCAAGTAGAAGTGATCATTTATGGAAGAAACACATGGAGAGGAAATGGGGCAAAGTGTTTGGTGATGCTGCTTATAGACAATGGAAATGTCATGTAGCTTCCAAGACCAGAGAGAAGATCTCAAACCAGCAAAATCAGAAAGGAATATTTGCTTTCCTTCATGGTGATTTCCGCCCCTTGTTTTGGATGAAAGCAAAATCAGAAAAGGGAACACATTCAAGTAGCTCATTACCGGAAGATTCATTCATGGCTCTGTATCTTTCTCTTGAGAGTGGCAAGTTTTGGTTCCCAGCTCAAGTCTACAACCGGGAGAACGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAACTTTGCTATGACTCTCGATCTGACACTTTTCTGGCAAGGTATTCACCTCATGGGAGATGGACAACTGAGGAAAACATAAGATGGGACCGACTCAGAGTGCCACCAATTGCCTCTTCTCCACATGCTCTTCACATCTCTGACTGTTTGGATGACTTGAGACCAGGAGATCACATTGAGATCCAGTGGAGAAGAAACAAAGAGTTCCCTTATGGTTGGTGGTATGGTGTAATTGGTCATTCGGAACAATGTCAAGGCCATGGGAACCATTGCCATTGTCACTATAATGATATGGTGATTTTGAAGTTCACACAGTACAGTGCTGGATCCAGATGGAGACAAACCATAATAGATAGGAAGCATCATATAGAAAAAGGAAATGAAATAGATGGTTTTTATGGAGGAATCAGGAAGCTGCATAGGAATGAAGAAATTACAAGGTGGAAGAAACTCTGGCCAACCAAAACTGTGGTACATGATTGA 1197 0.4294 MLYFLISFVSFLILSKSFTNKPLSSGESGTKIGSTGFWGSLSSWLLSSLRKGSTSTPCSFFRFSLVLSLKNNSLVSKVENEEEEVKVSLLDLPDLPLECILGHLSPAELCSVAAVCTSLRDSSRSDHLWKKHMERKWGKVFGDAAYRQWKCHVASKTREKISNQQNQKGIFAFLHGDFRPLFWMKAKSEKGTHSSSSLPEDSFMALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLARYSPHGRWTTEENIRWDRLRVPPIASSPHALHISDCLDDLRPGDHIEIQWRRNKEFPYGWWYGVIGHSEQCQGHGNHCHCHYNDMVILKFTQYSAGSRWRQTIIDRKHHIEKGNEIDGFYGGIRKLHRNEEITRWKKLWPTKTVVHD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03194 398 ProSiteProfiles F-box domain profile. 86 132 IPR001810 GO:0005515
Vimu6g03194 398 Pfam F-box domain 89 131 IPR001810 GO:0005515
Vimu6g03194 398 SUPERFAMILY F-box domain 89 183 IPR036047 GO:0005515
Vimu6g03194 398 PANTHER ESTS AU081301(E20138) 1 394 - -
Vimu6g03194 398 Gene3D - 72 165 - -
Vimu6g03194 398 SMART fbox_2 92 132 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03194 Vimu-Chr6 28411373 28413332 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03194 - - gmx:100806109 695.271