Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03192 ATGGATGTCATTGGACCCAGAGGCAGTATTTCTCTCTTGCATATTCCAGAACCCATTTTGGAACGCATTCTAAAGCTTCTTTCACCACAAGAACTGGTTCGAATGTCTGAAGTGTGTACTTGTTTAAGGGATAATTGTCGAAGTGATTCTTTGTGGGAAGTCCACATAAATCAGAAATGGGGTGGAGTCATTGGTGATGTTGCTTTCAAGGAGTGGCAATGGCATATCACAGCAGCTAAGGAGAAAGAGCTTAACCAATTGAATAAAGAAATCAATCAGAAGGGATCGCTGGGACCTTTCAATGGTACTTGGCCAATGTTATACCTCAGATCATATGTAGAAGATTGTAGCCATCTTAATAGCTCATTGTCAAAAAGCTTGATGGCCTTGTATTTCTCTCTAGAGAATGGCAAGTTCTGGTTCCCAGCTCAAGTCTTTATGGGAGTCTTTGTTCGTGACGCCTTACTTAGATATGATTCCAAAACTGATAACTTTCAAGCAAGACTACAATCTGGTGGTTGGCATATGATGGCCACAAACGTCCAATGGGATAAAGTGAGAGCTCCTCCAGTTGATACGCTTCCATATGTTAGATACGTCTCTGATTGTTTGCCAGAGTTGAAACCAGGTGATCATATTGAGATCCAACGGAGATACAGAAGAGAAACCTCTTATGATTGGTGCTATGCTATTATTGGGCACATGGACTCCTGTAATGAAAATGAGAAATTGTGCAGCTGTGGCCATTCTGATACATTGATGTTGGAGTTCAAGCAATACTCTGAGGGATCAAGAATGAGACGAGTAAAGCTACAGAGAAATGGGGAAGAATATGAAGAACCAAGTGGATGCTATGGAGGAATTAGAAAGCTTCGGAGTGAGGAGGAGATCCAAAGATGGGAGAAACATGTCCCACTTCGTCGAACTACTGTTAATATACCTTTGCAAGTTGGCTTTAATAACGTCTTGCATTAA 975 0.4133 MDVIGPRGSISLLHIPEPILERILKLLSPQELVRMSEVCTCLRDNCRSDSLWEVHINQKWGGVIGDVAFKEWQWHITAAKEKELNQLNKEINQKGSLGPFNGTWPMLYLRSYVEDCSHLNSSLSKSLMALYFSLENGKFWFPAQVFMGVFVRDALLRYDSKTDNFQARLQSGGWHMMATNVQWDKVRAPPVDTLPYVRYVSDCLPELKPGDHIEIQRRYRRETSYDWCYAIIGHMDSCNENEKLCSCGHSDTLMLEFKQYSEGSRMRRVKLQRNGEEYEEPSGCYGGIRKLRSEEEIQRWEKHVPLRRTTVNIPLQVGFNNVLH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03192 324 Pfam F-box-like 13 53 IPR001810 GO:0005515
Vimu6g03192 324 Gene3D - 7 112 - -
Vimu6g03192 324 PANTHER ESTS AU081301(E20138) 9 306 - -
Vimu6g03192 324 ProSiteProfiles F-box domain profile. 9 55 IPR001810 GO:0005515
Vimu6g03192 324 SUPERFAMILY F-box domain 8 63 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03192 Vimu-Chr6 28379938 28381710 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03192 - - pvu:PHAVU_001G122600g 471.855