Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03187 ATGAGAGCTGGTTTTAGAGATAGCCCTAAGTGGGGGATGTTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAAGAAATGATGGAATAAAGAGTTCCGTTGTTGGCCTTCTGAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATATTGTACAGTAAACTTACCTATAGTCAAATATAATAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCTTTCACCATAGTCTTCCGTACCCATGAAGTAAGTAAAATACCTGCAATAGTCATACACCTTTCATCATGA 309 0.3948 MRAGFRDSPKWGMLFWEGDQMVSWQRNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYNRSEELLLRWMELNSFTIVFRTHEVSKIPAIVIHLSS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03187 102 PANTHER SULFOQUINOVOSIDASE 1 89 - -
Vimu6g03187 102 SUPERFAMILY (Trans)glycosidases 2 92 IPR017853 -
Vimu6g03187 102 Gene3D Glycosidases 1 99 - -
Vimu6g03187 102 Pfam Glycosyl hydrolases family 31 2 90 IPR000322 GO:0004553|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03187 2 88 Glycoside Hydrolase AT5G63840 29.885 1.42e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03187 - - var:108329550 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03187 6 28343682 28343990 Vimu6g03187 6 28343682 28343990 ECH