Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03183 ATGGCGAGCACCCACATTGGGAATGCCGGAGAACCCGACTCCAAGTCTTTCAAGCCTCGCCCTAAGAAACCCTCCGACGACTTTATCACGCTCTTTCACGGCTCCGATCCGGTTCGCGTCGAGCTCACGCGCCTCCAGAATGAACTCAGAGGCATTCACCATTTCTTCAACTTCAATTTCACCCACCAACTTCTGTCTCGACGAAAAATAAAACATCATATCAGATGCCTCTTCATTCGTGTGTACAAAGAGCGTGCTATCTGGCTTTCAGAGAAAGATAGGGAGCTTGGGGATGCACTTGCGGAAATTAAGTCATTGAGGAATTCGAAGCGTCTTAAGGAAAAGGGGGTTGAAGAGCTGACAGATGAGCTGAACAAGGTGGATGAAAAACTAAAAGCTGCTGAAGTTCTTCTGGAAAGTAAGAACCTTGAAATAAAAAAAATCAATGAAGAGAAGAGGGAAGCACTGGCTGCACAATTTGCTGCAGAAGCTACTCTTCGGAGAGTTCATGCTGCACAGAAAGATGACGAAATGCCTCCTATTGAAGCTATTATTACGCCCCTGGAGGCAGAGCTGAAGCTTGCTAAGATGGAGGTGGCAAAGCTGCAGGATGACAACAGAGCACTAGATCGGCTAACCAAATCAAAGGAGGCTGCGCTTCTTGAGGCTGAGAGAATGGTTCAGATTGCTTTGGCAAAAGCATCTTTGGTTGATGATCTGCAAAACAAAAACCAAGAGTTATTGAAACAGATTGAAATATGCCAGGAGGAGGGCAAAATCTTGGACAAAATGCTTCGGCAAAAGGTTGCTGAAGTTGAAAAACTAACCCAAACTGTTCGGGAGCTTGAAGAGGCAGTCTTGGCTGGTGGGGCTGCTGCTAATGCTGTACGCGATTACCAGCGTAAAGTGCAAGAGATGAATGAGGAAAGGAAAATTTTAGAGCGGGAAGTTGCTCGTGCCAAAGTTACTGCAAACAGGGTTGCGACTGTAGTTGCAAATGAGTGGAAAGATGCTAATGATAAAGTGATGCCTGTGAAGCAGTGGCTAGAAGAAAGAAAATTTTTTCAGGCATTCTTCTTGGTTACATTGTGGTTAGATGTTTATATTCCTGATGCCAAGGGTGAAATGCAACAATTACGTGATAAATTGGCCATAGCTGAGCGTACCGCAAAAGCAGAGGCACAAATGAAGGAAAAATATCAATTGCGCTTCAAAGTTTTGGAAGAAAGGGTTAAGACATCTAATGGTAATTTCAAATTCACTGTATCAGATGGAAGAAACATTTCCACTGGGCCTTCACGGCGACAGTCTTTTGGTGGAGCTGAGAGTCCCTCTGCATCTTCTTCCAATGGGTATTTATCGAGGAAAACCTCAACATCAAGATCAGGGTCTCTAAGATCTAATAGTGCTAATGTGTTACTAAAACATGCCAAACTTTCATCTAGATCATTTGATGGTGGTAGTAGAAACCTGGAGAGAGAGAGGCCAACCTTTGATGCAAATGGGGTAGATAACATGCCAACAAAGACCAATAATCAGACCGTCACCAGTGAGACTATTACTGCACATGAGAGAGCAAATGGTATTCCAGTAAACAAATCTATAGCAGAAAATGAAGACTGTGTTTCAGGAATGTTGTATGACATGATGCAAAAAGAGGTTATATCTCTTAGGAAAGCTTGCCATGAAAAGGACCAAACTCTTAAAGACAAGGATGATGCAATAGAGATGTTGGCAAAAAAGGTTGATACATTGAACAAAGCTATGGAAGTTGAGGCCAGAAAAATGCGTAGGGAAGTTGCTTCTATGGAGAAGGAGGTTGCCGCAATGCGGATAAGCAAGGAACATGATCATAGGGCACGCAGAGCAAGTGCTCCTAGGGGGACTGTAAATTCCCGGACAATTTCTACCAGGTCAATTTTCTATCTTTATTTTTCTTTCTTGTGA 1947 0.434 MASTHIGNAGEPDSKSFKPRPKKPSDDFITLFHGSDPVRVELTRLQNELRGIHHFFNFNFTHQLLSRRKIKHHIRCLFIRVYKERAIWLSEKDRELGDALAEIKSLRNSKRLKEKGVEELTDELNKVDEKLKAAEVLLESKNLEIKKINEEKREALAAQFAAEATLRRVHAAQKDDEMPPIEAIITPLEAELKLAKMEVAKLQDDNRALDRLTKSKEAALLEAERMVQIALAKASLVDDLQNKNQELLKQIEICQEEGKILDKMLRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKILEREVARAKVTANRVATVVANEWKDANDKVMPVKQWLEERKFFQAFFLVTLWLDVYIPDAKGEMQQLRDKLAIAERTAKAEAQMKEKYQLRFKVLEERVKTSNGNFKFTVSDGRNISTGPSRRQSFGGAESPSASSSNGYLSRKTSTSRSGSLRSNSANVLLKHAKLSSRSFDGGSRNLERERPTFDANGVDNMPTKTNNQTVTSETITAHERANGIPVNKSIAENEDCVSGMLYDMMQKEVISLRKACHEKDQTLKDKDDAIEMLAKKVDTLNKAMEVEARKMRREVASMEKEVAAMRISKEHDHRARRASAPRGTVNSRTISTRSIFYLYFSFL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03183 648 Coils Coil 185 212 - -
Vimu6g03183 648 Coils Coil 89 158 - -
Vimu6g03183 648 MobiDBLite consensus disorder prediction 421 469 - -
Vimu6g03183 648 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 89 630 IPR009768 GO:0007010|GO:0008017
Vimu6g03183 648 Coils Coil 369 396 - -
Vimu6g03183 648 Coils Coil 265 285 - -
Vimu6g03183 648 MobiDBLite consensus disorder prediction 1 23 - -
Vimu6g03183 648 Coils Coil 568 613 - -
Vimu6g03183 648 Pfam Microtubule-associated protein 70 89 633 IPR009768 GO:0007010|GO:0008017
Vimu6g03183 648 Coils Coil 296 323 - -
Vimu6g03183 648 Coils Coil 237 257 - -
Vimu6g03183 648 MobiDBLite consensus disorder prediction 483 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03183 Vimu-Chr6 28303300 28307220 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03183 - - gmx:100814485 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03183 6 28303300 28307220 Vimu6g03183 6 28303300 28307220 ECH