Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03181 ATGGACACCGCCATGCGCACCACCAGCGTGCAACAACGCGCCCCCACAAAGAAAACCAAACCCAAGAAGAAGAACACCCCACACCCTGTCAAAGTAGTGTACATATCCAACCCCATGAAAATCAAAACCAGCGCCTCCGAGTTTCGTGCCCTCGTGCAAGAACTAACCGGCCAGGACGCCCAGTCGCCGCCTAACCCCACACGCTTCCACGCGCTCGATTCCTCCGATGATTCCTCTTCTGACAAGGTTACCAATGTTGACGACCATTTCATCCCTCTCCCAAAGGATCCCAACAATTCCGTACAACACCAGCCGCAACCCTCTTCTTCCTTTGAGGCTCCCGACGACGACGTTTTCACTCCCCAGATGATAGACAGCATTTCCTCCCTGCTTCCTGCAAGCCTATTCTATGAATCTCCCCATCTTAATTACTGGTGA 438 0.5297 MDTAMRTTSVQQRAPTKKTKPKKKNTPHPVKVVYISNPMKIKTSASEFRALVQELTGQDAQSPPNPTRFHALDSSDDSSSDKVTNVDDHFIPLPKDPNNSVQHQPQPSSSFEAPDDDVFTPQMIDSISSLLPASLFYESPHLNYW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03181 145 Pfam VQ motif 35 61 IPR008889 -
Vimu6g03181 145 MobiDBLite consensus disorder prediction 1 15 - -
Vimu6g03181 145 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 1 142 IPR039335 GO:0051091
Vimu6g03181 145 MobiDBLite consensus disorder prediction 53 73 - -
Vimu6g03181 145 MobiDBLite consensus disorder prediction 97 115 - -
Vimu6g03181 145 MobiDBLite consensus disorder prediction 1 30 - -
Vimu6g03181 145 MobiDBLite consensus disorder prediction 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03181 Vimu-Chr6 28232327 28232764 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03181 - - gmx:102661022 167.548