Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03176 ATGATTGGAAAAGATAGCGGTGTGATGAAGGCATGGGAGGCAACGATGAGAAAGACGCATGCAGTTGCGAAGAAGCGTGCTAACAGTATATTTGGGACGATATCGTTGGCACAGGTTACAGAAGAAGAAGATAACCAGGATGATTATGAGGAGGAAGATGAGAATGAGAACGAGGTATTTGAGGTATACCTTGAAGAGAAGGTTCTACCTAATGGGGATTACTACACGGGGGAATGGGCAAATAACTTCCCACATGGGCTGGGGAAATACCTGTGGACGGATGGGTGCATGTACGTTGGAGATTGGTACAAAGGGAAGACAAAGGGAAAGGGTAGGTTCAGTTGGCCTTCAGGAGCAACATATGAAGGGGAGTTCAAGGGTGGTTACATGTGTGGGACAGGGACTTACACAGGGTGTAGTGGGGAAACTTATAAGGGGCACTGGGAACTGAACTTGAAACAAGGTCATGGTTTTAAGAGTTATGCGAATGGGGATTGGTTTGATGGAGAGTGGAAGAGGGGTTTGCAAGATGGGGAGGGGAGGTATGAGTGGAAAGATGAGAGCCATTATATGGGGGAATGGAGGAATGGGAGTATTTGTGGTAAAGGGTCATTTGTTTGGGCTAATGGGAATAAGTTTGAAGGGTTTTGGGAAGATGGTGTGCCAAAGGGGAATGGGATTTTCAGGTGGGCAGATGGAAGTTCTTATGAGGGGAATTTCAGCAAGGATGGGAAGGAGCCAAATGGGACATACCATCCAAGTGAATCAGAAGAGGGGGAGGACCATAGTAATTGGGATCCTCAAGAGTTGTATAGTGAGTTGAGTGGGTATTTGGTTTGCCCTGGAGATAAGGTTCAGGTTATGCCATCACAGAAGAGGCTTGCGGTTTGGAGGTCTACAAAGACTGGGGAGAGTGCTAAAAATAGGAGAATGTCAGTGGATGGAAGGGTAAGTATTGGCTTGGACAGAACAGCTGATAGGTTGCAAACGTTGGATGGTGGGGAGAGTGATGGCAGTGCTAAAACTCCAACCATGGGGAGTGATCTCGAGGAAGACTTGACTGCTTTACGTGTAGAAGATCCTGCTGAAAATTTGGCTCAACTCCAACCTCTCAAAGCACCCAAGAAGTCAAAGAGACAGGGAGAGACCATTTGCAAAGGACACAAAAATTATGAGCTCATGCTCAATTTGCAGCTCGGACTCAGGCATTCTATTGCAAGGCCAGCTCCCACAGCATCACTTGATCTGAAGCCTGCAGCTTTTGATCCTAAGGAGAAAGTGTGGACAAGATTTCCACCCGAAGGATCCAAATATACTCCACCACATCCATCTTGTGACTTTAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAACTCTTAGGAAGCTATTCATGGTGGATCCAGCTGATTACATGTTATCCTTATGTGGAAATGATGCCCTTCGTGAACTTTCCTCTCCTGGAAAAAGTGGCAGCTTCTTTTACTTGACCAATGACGACAAATACATGATTAAGACAATGAAGAAAGCTGAAGTGAAAGTTCTATTGAGACTTCTTCCATCCTATTACAATCACTTTCGAGACTACAAAAATACTCTTTTGACAAAGTATTATGGCCTGCATTGTGTGAAGTTAAATGGACCTATTCAGAAGAAGGTTCGATTTATCATAATGGGCAACCTCTTCTGTTCTGAGTTTATCACCCATAGACGCTACGATCTGAAAGGTTCTTCACTTGGACGCACCTCAGATAAGCCTGAGACAGAAATTAGTGAAACCACTATACTTAAGGATCTTGATCTTAATTTCATATTTCAACTGGAGAAGTCAAATTTTGAAGAATTTTGCAGACAAGTTGATTTGGACTGTGAGATTCTTGAACAGGAGGGAGTTATGGACTATAGTCTTCTGGTGGGCATTTATTTCAAAGATATTTCGCCAGACGGGGAAATTATTCCTATACAATCTCAAACTCCTGCTGGTGATTTAGAAAATGAAGGAACTCCCGATACCACAAGTGAAGCCAAAGATGAACCTCCTTCTGATCCTTCTAGTGTGAAGTTGGGTGTGAACATGCCAGCAAGGGTTGAAAGGACGGTGAGAAGAAGTGGTTGTGAATTACAGCTTATAGGAGAACCAATTGGAGAGTTCTATAATGTTTCGTTGACTTTTGGTATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGCCTACAAATCCATTCAATATGACCCGACTTCAATATCAGCCGTTGATCCTATACAATATTCAAGGCGTTTTCGTGATTTCATACTTAGAGTATTCACTGAAAACTCTTGA 2334 0.434 MIGKDSGVMKAWEATMRKTHAVAKKRANSIFGTISLAQVTEEEDNQDDYEEEDENENEVFEVYLEEKVLPNGDYYTGEWANNFPHGLGKYLWTDGCMYVGDWYKGKTKGKGRFSWPSGATYEGEFKGGYMCGTGTYTGCSGETYKGHWELNLKQGHGFKSYANGDWFDGEWKRGLQDGEGRYEWKDESHYMGEWRNGSICGKGSFVWANGNKFEGFWEDGVPKGNGIFRWADGSSYEGNFSKDGKEPNGTYHPSESEEGEDHSNWDPQELYSELSGYLVCPGDKVQVMPSQKRLAVWRSTKTGESAKNRRMSVDGRVSIGLDRTADRLQTLDGGESDGSAKTPTMGSDLEEDLTALRVEDPAENLAQLQPLKAPKKSKRQGETICKGHKNYELMLNLQLGLRHSIARPAPTASLDLKPAAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFMVDPADYMLSLCGNDALRELSSPGKSGSFFYLTNDDKYMIKTMKKAEVKVLLRLLPSYYNHFRDYKNTLLTKYYGLHCVKLNGPIQKKVRFIIMGNLFCSEFITHRRYDLKGSSLGRTSDKPETEISETTILKDLDLNFIFQLEKSNFEEFCRQVDLDCEILEQEGVMDYSLLVGIYFKDISPDGEIIPIQSQTPAGDLENEGTPDTTSEAKDEPPSDPSSVKLGVNMPARVERTVRRSGCELQLIGEPIGEFYNVSLTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPIQYSRRFRDFILRVFTENS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03176 777 Gene3D - 169 218 - -
Vimu6g03176 777 Gene3D - 67 137 - -
Vimu6g03176 777 Gene3D - 219 260 - -
Vimu6g03176 777 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 476 770 IPR002498 GO:0016307|GO:0046488
Vimu6g03176 777 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 376 560 IPR027484 -
Vimu6g03176 777 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 70 197 - -
Vimu6g03176 777 PIRSF PIP5K_plant 10 777 IPR017163 GO:0005524|GO:0016308
Vimu6g03176 777 MobiDBLite consensus disorder prediction 238 267 - -
Vimu6g03176 777 SMART PIPK_2 417 774 IPR002498 GO:0016307|GO:0046488
Vimu6g03176 777 MobiDBLite consensus disorder prediction 248 267 - -
Vimu6g03176 777 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 387 773 IPR002498 GO:0016307|GO:0046488
Vimu6g03176 777 CDD PIPKc_AtPIP5K_like 390 772 - -
Vimu6g03176 777 Gene3D - 561 773 - -
Vimu6g03176 777 SUPERFAMILY SAICAR synthase-like 386 773 - -
Vimu6g03176 777 MobiDBLite consensus disorder prediction 653 689 - -
Vimu6g03176 777 Pfam MORN repeat 98 119 IPR003409 -
Vimu6g03176 777 Pfam MORN repeat 144 165 IPR003409 -
Vimu6g03176 777 Pfam MORN repeat 167 186 IPR003409 -
Vimu6g03176 777 Pfam MORN repeat 75 97 IPR003409 -
Vimu6g03176 777 Pfam MORN repeat 121 142 IPR003409 -
Vimu6g03176 777 Pfam MORN repeat 190 211 IPR003409 -
Vimu6g03176 777 Pfam MORN repeat 213 234 IPR003409 -
Vimu6g03176 777 SMART morn 142 163 IPR003409 -
Vimu6g03176 777 SMART morn 188 209 IPR003409 -
Vimu6g03176 777 SMART morn 96 117 IPR003409 -
Vimu6g03176 777 SMART morn 211 232 IPR003409 -
Vimu6g03176 777 SMART morn 119 140 IPR003409 -
Vimu6g03176 777 SMART morn 234 255 IPR003409 -
Vimu6g03176 777 SMART morn 73 94 IPR003409 -
Vimu6g03176 777 SMART morn 165 186 IPR003409 -
Vimu6g03176 777 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 84 774 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03176 Vimu-Chr6 28209765 28213460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03176 1 777 Acyl Lipid Metabolism Gene Families AT3G56960 63.613 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03176 K00889 - gmx:100808754 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03176 6 28209765 28213460 Vimu6g03176 6 28209765 28213460 ECH