Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03168 ATGGGTGAATCATCGGAGGATTTCTCTGTGGTGGTTTTAGCGTCGGACCTCGGCGTCGATGCGCGACCTTTCCTTGAACATCAACAGCAACAAGAAGAAGAAAATTGGCATGACTGTTCTCAATATCTCTTCCCCGATGAAGATTTCTCCGATCTCGATCAGTTGCAATTCCTCCTCCTCCAAGGCACCGACAAAAATTCCAATCGCATTCTCCGCATCGTCGGCAAGTACTTCCCAGCAACTGTTGTAAGTGCAGAACGACTGAAGAGATATGTGTTTCACAAGATCTGCAGTGAATTGCCGGACGAGCCATTCTGTATTGTTTACATGCACACCACCGTTCAGAAAGAGGATAATTCCCCTGGTATAACGATCTTGAGGTGGATTTATGAAGAACTTCCTGCTGATTTCAAGGACAGGCTTCAAATTGTGTATTTCATCCACCCTGGCCTTCGGTCCAGGCTAGTCATCGCTACTGTTGGGCGCCTCTTCTTGAGTGGAGGATTATATTGGAAGATCAAGTATGTAAGCCGGCTTCAGTATCTCTGGGATGATATAAAGAAAGGAGAGATAGAAATACCGGATTTTGTGAAAAATCATGATGATATTCTTGAGAATAGACCACTCACAGATTATGGTATTGAACCCGATCCCTTTCACTTGACTGGGATGCCTTCATCTACCTACTCATTTGGAAAGTACGAGGAGAGATGGGCGGGAAGGGATTATGTGTCGTAG 738 0.4526 MGESSEDFSVVVLASDLGVDARPFLEHQQQQEEENWHDCSQYLFPDEDFSDLDQLQFLLLQGTDKNSNRILRIVGKYFPATVVSAERLKRYVFHKICSELPDEPFCIVYMHTTVQKEDNSPGITILRWIYEELPADFKDRLQIVYFIHPGLRSRLVIATVGRLFLSGGLYWKIKYVSRLQYLWDDIKKGEIEIPDFVKNHDDILENRPLTDYGIEPDPFHLTGMPSSTYSFGKYEERWAGRDYVS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03168 245 CDD SEC14 62 198 IPR001251 -
Vimu6g03168 245 SUPERFAMILY CRAL/TRIO domain 50 190 IPR036865 -
Vimu6g03168 245 Gene3D - 46 192 IPR036865 -
Vimu6g03168 245 SMART sec14_4 51 200 IPR001251 -
Vimu6g03168 245 Pfam Divergent CRAL/TRIO domain 68 201 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03168 Vimu-Chr6 28088583 28090397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03168 - - gmx:100527837 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03168 6 28088583 28090397 Vimu6g03168 6 28088583 28090397 ECH