Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03166 ATGCTGCAGAAATGTATCTCAAATGGTGTCAAGTTTCACCAGGCGAAAGTTATCAAGATTATTCACGAGGATACCAAATCTTTAGCTACTGTGGTTCTTGATGCAACTGGGTTTTCAAGATGCTTGGTTCAGTATGATAAACCGTATAACCCGGGTTACCAAGTGGCTTATGGGATTCTGGCTGAGGTTGATGAACACCCGTATGATGTAGATAAAATGCTTTTTATGGACTGGAGAGATTCTCATCTGGACAATGACAAGGAGCTGAAGCAGAGAAATGATAGAATACCCACTTTTCTGTATGCAATGCCCTTTTCATCTACTAAGATATTTCTTGAAGAAACCTCCCTTGTAGCACGGCCTGGATTACGAATGGATGATATACAGGAAAGAATGGTTGCTAGGTTGAGACATTTGGGTATTAGAGTGAAAAGTATTGAAGAAGATGAGCAGGTTGTTGGCATTGGTGGTACCGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTTGCAAGGACCCTGGCTGCAGCTCCTATTGTTGCCAATTCTATTGTTCAGAGTCTGGGCTCTGATAGAGGTCTCTCCGGAGGAGATATATCTGCACAAGTGTGGAAAGATTTATGGCCCATCCAAAGGCGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAACTGGATTTACCTGGCACAAGGAGATTTTTTGATGCGTTTTTTGATCTGGAACCGCATTACTGGCATGGATTCTTGTCATCAAGACTGTTTCTTCCTGAGCTCTTATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCGAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAATGA 906 0.4183 MLQKCISNGVKFHQAKVIKIIHEDTKSLATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPYDVDKMLFMDWRDSHLDNDKELKQRNDRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLRHLGIRVKSIEEDEQVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQSLGSDRGLSGGDISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSYASNTSRIEIMAKGTLPLVNMINNLVKDTE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03166 301 PANTHER - 1 296 - -
Vimu6g03166 301 NCBIfam lycopene cyclase family protein 1 281 IPR010108 GO:0016117|GO:0016705
Vimu6g03166 301 Pfam Lycopene cyclase protein 1 278 - -
Vimu6g03166 301 SUPERFAMILY FAD/NAD(P)-binding domain 2 268 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03166 Vimu-Chr6 28074552 28075532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03166 K06443 - gmx:100810895 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03166 6 28074552 28075532 Vimu6g03166 6 28074552 28075532 ECH