Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03159 ATGGGTTGCTCAGCCTCAAGAACCATCACCATAGTGGCCAACAGTTATCCAGATCAGGATCCCTCTCCTTCTGTTTCTCTTGCTTCTTCTTCTTTCTCTTCCTCTTCTGCTTCTGCTTCACACATTAACTCCAACAATTCTTCACCCCCGGTTAGAAGAAGAGCCCTTTCTCTCCCAATGCCTCTTGTCCATCACCCTCCCATCAAAAAGGGCGACACACACCACCTTGTCTCCCTCACCTCCACCACCTATGGCTCCCTTCTTCTCATTGACCAAAAAGACCCCAACTTGACCCCAAATAACCAACCCCACCTCACCAAAACCTCAAACCAAACTGAGATAGAACACTCACTCTCCCCAGACTCGGTCATCAACACTTGGGAACTCATGGATGGCTTGGATGAAGAAGAAGAGGAGCCACAAGAAGGAATTGTGAAGCCTCCTAACATTTCTACTTTAGACAAGCCAAGTTCATGCAGATACACAGCATTTGATGGGTCTGCAAGGAAGAAACTGCTTGATTCCTTTGAGTCACTGAAAACTTCACAAACAGTAACGGAAAACTCTTCCTCTCCAGCATCAACCAAGAAGCCACTTTGGCAGCATTTATCGGAGGAAGCATTGCTTGCTAAGTTGGATCCAAGTGTGGCTTGGAGTTACAGGAGAGCATTATCATCGAGGCAACTTGGTAGAAACACTCTACCTAGAGATATCAGGTCAATGGGGTCTAGCCCTTTGGTATTTTCTCCTTCTTTTTCATTTTGTAAGAATAATTTGTGCCGTTTGCCTGGCACTGAAGACAGAATAGTGCTTTATTGTACTAGTTTGAGAGGGATCCGGAAGACCTATGAGGATTGTTGTTCAGTTAGGATGATTCTGAGGGGCTTCAGAGTTGCGGTTGATGAGAGGGATATCTCAATGGATTCATCCTATAGGAAGGAGTTGCAGGATGCTCTTGGTGGCAAGGCAGTGACCTTGCCTCAGGTATTTATCAGAGGGAAGTATGTGGGAAATGCTGATGAGATGAAGCATATGAATGAGTCTGGAGAATTAGCAAGGCTGTTGGAAGGATTCCCAACCCAGGAGCCTGGCTTTGTTTGTGACAACTGTGGGGATGCCAGGTTTGTACCATGCCCCAATTGCAATGGTAGCAGGAAGGTGTTCGAACATCAAGAAGGAGGGTTGAGAAGGTGCCCTGATTGCAATGAGAATGGCTTGATTAGATGCCCAGGTTGCTGTACATGA 1245 0.4635 MGCSASRTITIVANSYPDQDPSPSVSLASSSFSSSSASASHINSNNSSPPVRRRALSLPMPLVHHPPIKKGDTHHLVSLTSTTYGSLLLIDQKDPNLTPNNQPHLTKTSNQTEIEHSLSPDSVINTWELMDGLDEEEEEPQEGIVKPPNISTLDKPSSCRYTAFDGSARKKLLDSFESLKTSQTVTENSSSPASTKKPLWQHLSEEALLAKLDPSVAWSYRRALSSRQLGRNTLPRDIRSMGSSPLVFSPSFSFCKNNLCRLPGTEDRIVLYCTSLRGIRKTYEDCCSVRMILRGFRVAVDERDISMDSSYRKELQDALGGKAVTLPQVFIRGKYVGNADEMKHMNESGELARLLEGFPTQEPGFVCDNCGDARFVPCPNCNGSRKVFEHQEGGLRRCPDCNENGLIRCPGCCT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03159 414 Pfam Glutaredoxin 270 336 IPR002109 -
Vimu6g03159 414 MobiDBLite consensus disorder prediction 14 52 - -
Vimu6g03159 414 Gene3D Glutaredoxin 267 359 - -
Vimu6g03159 414 CDD GRX_GRX_like 268 409 - -
Vimu6g03159 414 MobiDBLite consensus disorder prediction 14 53 - -
Vimu6g03159 414 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 73 413 - -
Vimu6g03159 414 ProSiteProfiles Glutaredoxin domain profile. 257 362 - -
Vimu6g03159 414 SUPERFAMILY Thioredoxin-like 265 356 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03159 Vimu-Chr6 28002947 28005812 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03159 K17479 - gmx:100811817 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03159 6 28002947 28005812 Vimu6g03159 6 28002947 28005812 ECH