Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03155 ATGAACCCAGGGCTCCTTGCAGGTGCGACCTTGCTTGCACTCTTAGCCATCACCTTCTCCTTCTTCAACCCTCTAGCCCTGTTTTCTCCGCCCCATCTTCCGGGATCCAAGGATCACCTCCACGAAGCGCGGATACTCCATGTCGCCGGCGCCGTCGGCCCTGAAAGTCTTGTTTTTGACGCTCACGGCGGAGGGCCCTACACTGGCGTAGCCGACGGCCGGATTTTGAAGTGGGAAGGCGAGCAGCAGGGGTGGACTGAATTTGCTTTCACCAGTTCCAATAGGTCGAATTGTGTTCGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAGTTTGATAAGAAAACTGGAGATCTATACATTGCTGATGCCTATCTAGGCCTAAAAGTAGTGGGATCTGCAGGGGGTTTGGCCACGGAAGTGGTAACAGAAGTTGAAGGCCAGCCCTTGCAGTTCACCAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGACTCAAGCTCAATCTTCCAGAGAAGGCAATTTATGCTTGTACTCCTTAGTGGAGACAGGAGCGGTAGGTTAATGAAATATGACAAGTCAACAAAGGAAGTGAAGGTTTTATTACGTGACATTGCTTTTCCTAATGGTGTTGCTTTAAGCAAAGATGGATCTTTTGTTCTGGTAGCTGAAACCACTACTTGCAAGATCTTGCAACTATGGCTTCGTGGACCCAAGGCTGGTGAAGTGGATACTTTTGCCGAACTACCTGGTTTTCCAGACAATATTAGAAGAAATTCAGAAGGGCATTTTTGGGTAGCTCTGCATGCAAAAGGAAGCCCTTTTGCGAAATGGGTTTCCTCCAATCCATGGGCGGGAAAGTTGATGCTAAAGATTGGCTTTAACTTCAAACAATTGCACACATCAGTTGCAGGGTGGAAGGCTCATGCTGCTGCTCTAAAGCTAAGTGACAGAGGAGAGATACTAGAAGTCTTGGAAGATTGTGAAGGAAAGACATTAAAGTTCATCAGTGAAGTTGAAGAGAAAGATGGTAAGCTTTGGATTGCATCTGTGTTGATGCCTTTCATTGGCATTTATAATTTGTGA 1116 0.4659 MNPGLLAGATLLALLAITFSFFNPLALFSPPHLPGSKDHLHEARILHVAGAVGPESLVFDAHGGGPYTGVADGRILKWEGEQQGWTEFAFTSSNRSNCVRPFAPELEHVCGRPLGLKFDKKTGDLYIADAYLGLKVVGSAGGLATEVVTEVEGQPLQFTNDMDISEDEDVIYFTDSSSIFQRRQFMLVLLSGDRSGRLMKYDKSTKEVKVLLRDIAFPNGVALSKDGSFVLVAETTTCKILQLWLRGPKAGEVDTFAELPGFPDNIRRNSEGHFWVALHAKGSPFAKWVSSNPWAGKLMLKIGFNFKQLHTSVAGWKAHAAALKLSDRGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPFIGIYNL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03155 371 SUPERFAMILY Calcium-dependent phosphotriesterase 25 369 - -
Vimu6g03155 371 Gene3D - 37 371 IPR011042 -
Vimu6g03155 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 14 364 - -
Vimu6g03155 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Vimu6g03155 371 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 38 371 - -
Vimu6g03155 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03155 Vimu-Chr6 27920652 27923180 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03155 - - gmx:100815025 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03155 6 27920652 27923180 Vimu6g03155 6 27920652 27923180 ECH