Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03130 ATGGCTATGCTGTTGTCTACTAGTGTTGTTCCTTCTACCAAGCTTGTCATCTTCAACAACAGTACACAAGAGCGTGCACTTCCAAGTTTTCGTCATTTCTCAGATAATAGCAAGCACTTTGAGAAAGTGTCGTCCTTGATTGCTTTTGCTGTGAAGGGTGACTTTACTCACGCCAAAGCCACTAGGAGAGATAGTAGAAACCCATTGCTGAGTGAGGGGAGAGATGAAGATGAAGCTAGAGGACCCATTTGTCCTGGTTGTGGAGTCTTCATGCAAGATAAGGACCCTGACCTTCTAGGGTATTACCAACCAAAGACGGTGAAAGTGGAAGAGTTTTCAGAAGAGGATGATGATTTCTTTGATGATGATGATGATGTTGGTGATTATCCAGAAGAAGATGTCGGTGAAGTGGGGTTTTTTAATGAAAGTATTAAGCTTGGAGAAGAGAGTAAGAGATTAACAGACGAGATTGACTGGGATTCTGATGACTGGGAAGCTAATTTACTGGGTGAAGATGATGAGAAGTTGGAATTGGATGGGTTTGAACCTGCTGGTGTTGGGTATGGTAACATTACTGAGGAGTACTTGGAAAAGGTAAAGAGGAAGAAGGTATCCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTAACAGGGAGAAAGAAGAAGTCACTGTGTGTGCTCGGTGTCATTCCTTGAGAAACTATGGCCAGGTGAAGAACCAGTCGGCGGAGAATTTGATACCTGATTTTGATTTCAATAGGTTGATTTCGACGCGGCTGATGAACCCTTCTGGAAGTGGCAGTGCTACTGTTGTTGTAATGGTTGTGGACTGTGTTGATTTTGATGGTTCATTCCCTAGGATTGCTGTAAAATCCTTGTTTCAAGCATTGGAAAGAATACAGGACAACTCCAAGCGGGCCAAGAAGCTGCCGAAGCTTGTTCTTGTGGCAACAAAGGTTGATTTACTTCCCTCCCAGGTTTCTCCTACGAGATTAGATAGATGGGTTCGAAACCGTTCAAGATCTGGAGGAGCACCTAAACTAAATGGGGTTTATTTGGTCAGTTCAAGGAAGGATTTAGGTGTAAGGAATTTGTTGTCCTTCGTGAAGGATTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGGGCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCTTTTGCAAAGAAACAAGGAGCTAAAGTTACCAAGCTGACAGAAGCTCCAATTCCTGGGACAACACTAGGGATCTTGAGAATTGCAGGAGTTTTGCCAGCTAAGACTAAGATGTTTGACACTCCAGGGCTCTTGCACCCATATTTAATGTCAATGAGATTGAATCGGGATGAGCAAAAGATGGTTGAGATCCGAAAGGAACTCCGGCCTAGGTCATATAGAATTAAGGCAAGTAACTTATCACTATTTCTGTTCTCTATCCTGGTAGGACAAGCAATACTCATTGGTGGCTTGACAAGACTTGACCTTGTTGGAGCCTCTGTTGAAACAATATATGTCACAGTTTGGGCATCACCAAATGTTTCTCTTCACATGGGCAAAATTGAAAATGCTGATGAGGTTTGGAGAAAACATGTTGGTATCAGGTTACAGCCTCCCATTGGTAATGACCGTGGTGCTGAATTAGGAAGATGGCAAGAAAGAGAAGTAAAAGTGTGTGGAACTAGTTGGGATGTCAACAGCATTGACATAGCAATAGCAGGTTTAGGTTGGTTCTCATTGGGCCTCAAAGGCGAAGCAACCACGAAATTGTGGTCCTTTGATGGGGTTGAAGTAACTTTGAGAGAGCCTTTGGTGCTTGACCGAGCACCATTCCTTGAGAAGCCAGGATTTTGGTTACCTAAAGCCATCTCTGATGCTATTGGCAACCAAACCAGACGTGAAGCTCAAAGAAGGAAACAACTTGACAATGAGGACTCGGAATACGTGGGAGCAGGGGCAGGGGCTGAGTTATCTGCATGA 1983 0.4407 MAMLLSTSVVPSTKLVIFNNSTQERALPSFRHFSDNSKHFEKVSSLIAFAVKGDFTHAKATRRDSRNPLLSEGRDEDEARGPICPGCGVFMQDKDPDLLGYYQPKTVKVEEFSEEDDDFFDDDDDVGDYPEEDVGEVGFFNESIKLGEESKRLTDEIDWDSDDWEANLLGEDDEKLELDGFEPAGVGYGNITEEYLEKVKRKKVSKAEKKRMAKEANREKEEVTVCARCHSLRNYGQVKNQSAENLIPDFDFNRLISTRLMNPSGSGSATVVVMVVDCVDFDGSFPRIAVKSLFQALERIQDNSKRAKKLPKLVLVATKVDLLPSQVSPTRLDRWVRNRSRSGGAPKLNGVYLVSSRKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINAFAKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRSYRIKASNLSLFLFSILVGQAILIGGLTRLDLVGASVETIYVTVWASPNVSLHMGKIENADEVWRKHVGIRLQPPIGNDRGAELGRWQEREVKVCGTSWDVNSIDIAIAGLGWFSLGLKGEATTKLWSFDGVEVTLREPLVLDRAPFLEKPGFWLPKAISDAIGNQTRREAQRRKQLDNEDSEYVGAGAGAELSA 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03130 660 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 40 646 - -
Vimu6g03130 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 459 IPR027417 -
Vimu6g03130 660 Coils Coil 202 222 - -
Vimu6g03130 660 MobiDBLite consensus disorder prediction 632 646 - -
Vimu6g03130 660 MobiDBLite consensus disorder prediction 630 660 - -
Vimu6g03130 660 Pfam 50S ribosome-binding GTPase 379 454 IPR006073 GO:0005525
Vimu6g03130 660 CDD YqeH 226 438 - -
Vimu6g03130 660 Gene3D - 265 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03130 Vimu-Chr6 27672808 27676965 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03130 - - gmx:100805561 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03130 6 27672808 27676965 Vimu6g03130 6 27672808 27676965 ECH