Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03118 ATGGAGTCACTGCAGGGTCCTGAAATGAAAGTTCACATTGGAGAGTTCCCTTATGTGGATGTCTCAGGGGGAGAGTTGTGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAGTCATGGACAGATTACCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGTATAAGCGGGCAAGCCTTCAAACATGGACCTCAGATCAATAACATCTTTCAGCTTGAAGTCATCACAGAATTCTCTATATTTACTAGGGATCAAGAGCATTTAATATCACTAAAAAACACATTTGATTATATTGAAGGGTTTGTGATCATAAACAAAACTGGCATCCTTAACAATTGGAGATCATCCTTTGACCCCAAAAGTCCACTTCAAGCTAGCCAATTCAATTCTGATGGAAGAACCTTTTACTGTCTTGAGATGGCAAAATACTTCAACCCTGATGAAGCAGAACTCATGAATCAGCTGAGTTACATCCAACCAACTCTCTTCAGATCAGAAGTTTCTTACGTGGAATTCCTAGACAGAGTGCATGTTTCTGAGAAAAAACTAAGAGCAAAAGGCTTGTGGGAAGTCCCCCATCCCTGGCTGAACCTTCTGATCCCAAGAAGTGAGATTCATGACTTTGCTGAAGAAGTATTTGGCAAAATTCTTAAGGACACAAGTAATGGCCCCATACTCATTTACCCCGTCAACCAAACAAGATGGAACAGTAAGACATCTTTGGTTACCCCAGAGGAAGATGTTTTTTACCTGGTGGCTTTTCTATCCTCGGCAGTCCCAAATTCTACTGGTGCAAACAGTTTAGAACAGATTGAAGCCCAAAACAAAAGGATCATAGAATTCTACACCAGTGCACAGCTGAAAGTGAAGCAATACCTTCCCCATTACAGCACACAGGAAGAATGGGAAGCCCACTTTGGGTCACAATGGGAGGCATTCGTGGAAAGAAAAAGGGCCTATGACCCACTAGCACTGCTTGCCCCTGGCCACAGAATCTTTCAAAAGGCAGTGTCTGCTTCATGCTGGTCTTAG 1050 0.4276 MESLQGPEMKVHIGEFPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVITEFSIFTRDQEHLISLKNTFDYIEGFVIINKTGILNNWRSSFDPKSPLQASQFNSDGRTFYCLEMAKYFNPDEAELMNQLSYIQPTLFRSEVSYVEFLDRVHVSEKKLRAKGLWEVPHPWLNLLIPRSEIHDFAEEVFGKILKDTSNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPNSTGANSLEQIEAQNKRIIEFYTSAQLKVKQYLPHYSTQEEWEAHFGSQWEAFVERKRAYDPLALLAPGHRIFQKAVSASCWS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03118 349 SUPERFAMILY FAD-binding/transporter-associated domain-like 18 82 IPR036318 GO:0050660
Vimu6g03118 349 Gene3D - 8 82 IPR016169 -
Vimu6g03118 349 Gene3D - 299 339 IPR016167 -
Vimu6g03118 349 PANTHER GULONOLACTONE OXIDASE 83 340 - -
Vimu6g03118 349 SUPERFAMILY FAD-linked oxidases, C-terminal domain 83 339 IPR016164 GO:0003824|GO:0050660
Vimu6g03118 349 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 82 339 IPR015345 GO:0009690|GO:0019139|GO:0050660
Vimu6g03118 349 Gene3D - 83 298 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03118 Vimu-Chr6 27530713 27532703 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03118 K00279 - gmx:100777568 612.453