Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03115 ATGACTGTCCAAGATGCCTTCCCGAGTGAAGATGAAGAGTTTGGCTACACAGAAGGAAGTAGCAATGGGCCAGAGAATTGGTGGTGTCTCAACCCGAAATGGAGAGTATGTGGGAAAGGAAAACGACAATCTCCCATTGATCTCTCAGACAAAGTGGTGCACGAGTTTCCTCAACTGGGTAATCTCCAAAAATATTACAAACCAGCTCCTGCTCTTCTCAAGAATATGGGTCATGCCATAATGGTGCAATGGAATGGGAATGCAGGGCATCTTAACATAAATGGAACTTACTACAAACTGATTCAATGTCATTGGCACACACCTTCAGAGCACACGTTCAATGGAACAAAGTTTGAGTTGGAACTGCATGCAGTTCATCAAAACTCCAAAGGAGAGATTGCTGTTATTGGAATATGGTATAAAATTGGACGTCCAGATGGCTTGCTTTCAAAGCTTCTGAAGGACTTAAAATCACTTGGTGAGAAGGACATAGATTTAGGAGTTATTAACCCAGGAATGATGGAGTTTGGAGACAGAAAGTACTACAGATATGTTGGTTCTCTTACAACTCCACCATGCACTGAAGGTGTTGTTTGGACCATAGTTAAGAAGGTGAAGACAGTATCAAAGGAGCAGTTGAGAGCACTCAAAGAAGCTGTTCATCATGTAAGCCAATTAAAAGATGAAGAATTTGGCTACACAGAAGGAAGTAGCAATGGGCCGGAGAATTGGTGGCGTCTCAACCCAAAATGGAGAGTATGTGGGAAAGGAAAACGACAATCTCCCATTGATCTCTCAGACAAAGTGGTGCACGAGTTTCCTCAATTGGGTAAACTCCAAAAATATTACAATCCAGCTCCTGCTCTTCTCAAGAATATGGGTCATGCCATCATGGTGCAATGGAATGGGAATGCAGGGCATCTTAACATAAATGGAACTTACTACAAACTGATTCAATGTCATTGGCACACACCTTCAGAGCACACGTTCAATGGAACAAAGTTTGAGTTGGAACTGCATGCAGTTCATCAAAACTCCAAAGGAGAGATTGCTGTTATTGGAATATGGTATAAAATTGGACGTCCAGATGGCTTGCTTTCAAAGCTTCTGAAGGACTTAAAATCACTTGGTGAGAAGGATATAGATTTAGGAGTTATTAACCCAGGAATGATGGAGTTTGGATGCAGAAAGTACTACAGATATGTTGGTTCTCTTACAACTCCACCATGCAGTGAAGGTGTTGTTTGGACCATAGTGCAGAAGGTGAAGACAGTATCAAGGGAGCAGTTAAGAGCACTGAAAGAAGCTGTTCATCATCCATATTCAGAGAGGAGAGGTCGTGATGAGTCTAACGAAGGTGGTTGGCGCCAAAGACAACGACACAAGTGTTGTCATGAGTGGCTAGAAAATATAGCGGAAGCAAACTGTGATCGTGATTTTGACAACACTATGGTTGCTTGGCGAGACGAGAAAAACTGTGGTCACCGTGACAACAACGGTGATGACAACTCTAACGACGACGACGACTCTAACAACGACGATGATTGA 1548 0.4264 MTVQDAFPSEDEEFGYTEGSSNGPENWWCLNPKWRVCGKGKRQSPIDLSDKVVHEFPQLGNLQKYYKPAPALLKNMGHAIMVQWNGNAGHLNINGTYYKLIQCHWHTPSEHTFNGTKFELELHAVHQNSKGEIAVIGIWYKIGRPDGLLSKLLKDLKSLGEKDIDLGVINPGMMEFGDRKYYRYVGSLTTPPCTEGVVWTIVKKVKTVSKEQLRALKEAVHHVSQLKDEEFGYTEGSSNGPENWWRLNPKWRVCGKGKRQSPIDLSDKVVHEFPQLGKLQKYYNPAPALLKNMGHAIMVQWNGNAGHLNINGTYYKLIQCHWHTPSEHTFNGTKFELELHAVHQNSKGEIAVIGIWYKIGRPDGLLSKLLKDLKSLGEKDIDLGVINPGMMEFGCRKYYRYVGSLTTPPCSEGVVWTIVQKVKTVSREQLRALKEAVHHPYSERRGRDESNEGGWRQRQRHKCCHEWLENIAEANCDRDFDNTMVAWRDEKNCGHRDNNGDDNSNDDDDSNNDDD 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03115 515 PANTHER CARBONIC ANHYDRASE 229 441 IPR023561 GO:0004089|GO:0008270
Vimu6g03115 515 MobiDBLite consensus disorder prediction 1 22 - -
Vimu6g03115 515 SUPERFAMILY Carbonic anhydrase 13 220 IPR036398 -
Vimu6g03115 515 MobiDBLite consensus disorder prediction 491 515 - -
Vimu6g03115 515 ProSiteProfiles Alpha-carbonic anhydrases profile. 229 466 IPR001148 -
Vimu6g03115 515 ProSiteProfiles Alpha-carbonic anhydrases profile. 12 218 IPR001148 -
Vimu6g03115 515 CDD alpha_CA_prokaryotic_like 23 222 IPR041891 -
Vimu6g03115 515 Gene3D Alpha carbonic anhydrase 229 462 IPR036398 -
Vimu6g03115 515 Gene3D Alpha carbonic anhydrase 10 228 IPR036398 -
Vimu6g03115 515 SMART Carb_anhydrase_2a 233 447 IPR001148 -
Vimu6g03115 515 SMART Carb_anhydrase_2a 16 231 IPR001148 -
Vimu6g03115 515 Pfam Eukaryotic-type carbonic anhydrase 23 223 IPR001148 -
Vimu6g03115 515 Pfam Eukaryotic-type carbonic anhydrase 240 444 IPR001148 -
Vimu6g03115 515 SUPERFAMILY Carbonic anhydrase 230 440 IPR036398 -
Vimu6g03115 515 CDD alpha_CA_prokaryotic_like 240 439 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03115 Vimu-Chr6 27487124 27505434 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03115 K01674 - gmx:100306209 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03115 6 27487124 27505434 Vimu6g03115 6 27487124 27505434 ECH