Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03109 GCGACTGGTAGTAATTACTGGTCACCGCAACATGAATGTGACTTCTACTTTGGGTGTGGCCCAGATGTTATAGAGGAGGACGCGTTGAACATGGAATCCTGTATTCGGGTTTTGAGAATATTGATCACCAAGGCGGATACTGAGATTGAGGAACTTGAAAGAGATCTCTTGTTGCTTCAGAAGGAGTTGGCCTGTTTTGAGCATGAAAAATGGCCTGATATATGCAGTGGTGTTCTCAGTGAGAGAATCAGCCAGCTTGGTGTGGCGATTAGAACATTAAAGAATGATTGTGCTGATGAGGCTGAAGTGCAGTTACTGCTAGATAGTGAACCTGCTGGGACGCTTCATGAAATACTAGCCCAGTATCTAGATGTGAATGTCTTGAGTCCAGTTGTGAATGTTACTGAACATGCACCAGACAAAGATTCTAACACCCTTAATATGATCATTAAGGAAGAAGGAAAAGATCTTCATGGAACCTCAGAAAGCTCTGGAAGCTTGGAACTTCTTTTGGAGATTCAGAAGTCAGATACTCCGGAAAAGATTGAGGAATTGTCTGAAGAACTTGTTAGAAGTCCTGATTTGGCGGGCGTTATCCTTGCATCCTACCACTCTGATGGTATAAAATTATCAGAAACATTTGATGATCAAGTTGCTGGAAATGAAGTCAGAAAAAGCCAACTCATTAATTCAAATACAGGTCTAATGTTGGATTTGTTTTCGGCCAAAAGTGAAGCCAAGAAAGAAAATGAATTTGTCAAAGAAAAAGATGTTAGCCCAGATGAATTTAGACCTGCAATTGACATCAATGGGAAGAAAACGGCTCCACATTCCATATTAGATACTTCACAACGACAGAAACGAGCAAAACCTAATTTAGACAAAGAGCCATGTGATTTTGCTCCAAAAGCTGCACAAAGGGACTGCAAGAAAGAACCCAAGGTTGCTCCAGACGAAGATTTGAACTCCCTGAATTACCCTTTACAAGTTGTATATCCTAAAACATTATGTATCACTGATACAGAATTTTGCTCCGTTAAAGATAGCAATGGGATGCATACCAAGAGTTCATTGTATACTGGGTTACAGCTGATGGATGTAGATGAAGATAAAGGGGAAGAACATGAACAAGACCTTAAATCCCAACTGAGAACTAACCTCAGAAAGTCCAAGATGAGTTTCCCTTCAAAGCTTAAAGCTTCGGAAAAGCAGGAACTGGAACTAAAGGCATTTTCTTCCAGAGAACCATTTGACAGTTGTACGGAAGTTATTCCAAGTGCATCCATAGTTGTATCAACTAAGAGTCAGCGAAGATCCAAATCCTGTACCGATGTTACCATTTTAAACGAGTCAATGAAGCGGAAGATTATTACTAAAGGGGCAGTGCAACCAAACAAGCATGAGACTGAAGGTCGTGCTATTGTTCTTTTTGACAGTAAATTTTCTGAATTACAAAAGAAAAGAAGAGTTACAAAGTTGCCTATCACTGTTGACATACGGAATTCAAGTGTTAATTTGGACGTACCAAATTCGGACGGGGTTTCTATGGACAAAAAAAACCAGTTAGCTCCTCGTACTCACAAGTCACATTCCTTGGTGGATTCTCATGATGAGACCTTATCTTTGAAAAGCTTGTCATTGACTGATTTGAGGGCTATGGCAAAGAAACACAATGTAAGAAAATATTATAAGCTTCGAAAAGTAGATTTGGTTGAACAGTTAGCTCGGCGATTGAGTAGCTGCTGA 1746 0.3998 ATGSNYWSPQHECDFYFGCGPDVIEEDALNMESCIRVLRILITKADTEIEELERDLLLLQKELACFEHEKWPDICSGVLSERISQLGVAIRTLKNDCADEAEVQLLLDSEPAGTLHEILAQYLDVNVLSPVVNVTEHAPDKDSNTLNMIIKEEGKDLHGTSESSGSLELLLEIQKSDTPEKIEELSEELVRSPDLAGVILASYHSDGIKLSETFDDQVAGNEVRKSQLINSNTGLMLDLFSAKSEAKKENEFVKEKDVSPDEFRPAIDINGKKTAPHSILDTSQRQKRAKPNLDKEPCDFAPKAAQRDCKKEPKVAPDEDLNSLNYPLQVVYPKTLCITDTEFCSVKDSNGMHTKSSLYTGLQLMDVDEDKGEEHEQDLKSQLRTNLRKSKMSFPSKLKASEKQELELKAFSSREPFDSCTEVIPSASIVVSTKSQRRSKSCTDVTILNESMKRKIITKGAVQPNKHETEGRAIVLFDSKFSELQKKRRVTKLPITVDIRNSSVNLDVPNSDGVSMDKKNQLAPRTHKSHSLVDSHDETLSLKSLSLTDLRAMAKKHNVRKYYKLRKVDLVEQLARRLSSC 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03109 581 MobiDBLite consensus disorder prediction 274 297 - -
Vimu6g03109 581 Coils Coil 35 69 - -
Vimu6g03109 581 SMART Rho_N_2_a 541 580 IPR011112 GO:0006353
Vimu6g03109 581 MobiDBLite consensus disorder prediction 510 534 - -
Vimu6g03109 581 MobiDBLite consensus disorder prediction 283 297 - -
Vimu6g03109 581 Pfam Rho termination factor, N-terminal domain 542 574 IPR011112 GO:0006353
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03109 Vimu-Chr6 27443596 27447465 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03109 - - vum:124846858 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03109 6 27443596 27447465 Vimu6g03109 6 27443596 27447465 ECH