Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03108 ATGAGCACACATGGTTCTTACAGCATGAGATCCAAAGCCTCCTTTGAAAATGAAGGCAAGGCCGCGGTGAAAGAAAGTGGGGGAGGAGGGAGTGGAGGGAAGAACGGGAAGACAATGTCCTCCAACAGCAAGGAGAATCTGTTCATATGTTTTCTGGTGACACTTTGGTACTCTTCAAACATTGGTGTGATCCTTCTCAACAAGTACCTGCTTTCAAACTATGGGTTCAAATTCCCCATCTTCCTCACAATGTGCCATATGTCAGCCTGTGCTGTTTTCAGCTATATCTCCATTGTGTTCTTCAAGGTGGTGCCTCAGCAGATGATCAAATCGAGGTCCCAGTTCATGAAGATTGCAACTTTGAGTCTTGTCTTCTGTGCCTCTGTGGTGGGTGGCAACATATCCCTCAGGTACCTCGCCGTGTCCTTCAACCAGGCGGTCGGGGCAACCACACCCTTTTTCACTGCTGTCTTTGCCTATTTGGCTACCCTTAAGAGAGAGGCTTGGGTTACGTATGCTGCCCTTGTTCCTGTTGTTGCTGGTGTTGTCATTGCAAGTGGGGTATGCTCGATTGGGATAGGGGCCTTGATTACTGATTTGTGA 603 0.4826 MSTHGSYSMRSKASFENEGKAAVKESGGGGSGGKNGKTMSSNSKENLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVFSYISIVFFKVVPQQMIKSRSQFMKIATLSLVFCASVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYAALVPVVAGVVIASGVCSIGIGALITDL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03108 200 PANTHER SOLUTE CARRIER FAMILY 35 51 187 - -
Vimu6g03108 200 Pfam Triose-phosphate Transporter family 49 186 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03108 Vimu-Chr6 27426174 27426995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03108 40 187 Organic Solute Cotransporters AT5G04160 82.432 9.33e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03108 - - vum:124820934 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03108 6 27426174 27426995 Vimu6g03108 6 27426174 27426995 ECH