Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03092 ATGGAAGACAATACATGGGCGTGTTCTTCGAGTGAAGATGGTGATGATGAGGTCTATTTCCAAAATGCAAGTGATGAAGAGGAGCTCGGCTTTTCATCTGCTTCTATACCTAAGTTGCAGTTCAGGAACGTGAAATCCAAAAGCATTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAAAATGGCAAAATGTGGATAACAACTGGAATAGTTCGTAGTGGCAAGATTTATTCTTCAATTGAGGAGACTTTGTATCTTATGGAACTGGGAGCCTTACAGCTATTTGAAAATAGTGGTAGAAGCATATCTCTCGCAGAAACGTATGAAAAGGTTGCTGGCGGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGTTACATAATTGTGCGGCATGGTGTTCTTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAGACCTGCTGCTCTTGAAATCGCAGAAGAAAGCAAAGAACTAATAGACGTGGGCTCTGTCCAAAGATTATTTTCTGAGTTGCGAGTAAATGATTTGAGGCCAGATTTTGATGTTTATCTTCCGAACAGCCGATTTAGAAAGTCTTCCCCTGGTGATCCAAGTTTTTTACTGTACTTATCTAGGGGTCATCCACCGTCTAGAACAGAGATTGAAGTCCTTGAGAAGCAATGTGGTGGCATTCCTTTGAAAATCTGCCTGGTCACGGAGGGAAGGGTCAGTTTCTTTTCCTTTGACAAGGTGGATCTTCCTGTTCTACCCTGA 783 0.4215 MEDNTWACSSSEDGDDEVYFQNASDEEELGFSSASIPKLQFRNVKSKSIWNEEMGMGEVIEKNGKMWITTGIVRSGKIYSSIEETLYLMELGALQLFENSGRSISLAETYEKVAGGKSGCCWELFEVYRHLKSLGYIIVRHGVLWSLKSIKSSHRPAALEIAEESKELIDVGSVQRLFSELRVNDLRPDFDVYLPNSRFRKSSPGDPSFLLYLSRGHPPSRTEIEVLEKQCGGIPLKICLVTEGRVSFFSFDKVDLPVLP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03092 260 Pfam tRNA-splicing endonuclease subunit sen54 N-term 35 97 IPR024336 -
Vimu6g03092 260 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 13 157 IPR024337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03092 Vimu-Chr6 27292821 27294551 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03092 K15326 - qsa:O6P43_010121 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03092 6 27292821 27294551 Vimu6g03092 6 27292821 27294551 ECH