Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03077 GGGTTTATTATTCCTAAATTATGTTTTGCTTTCCAAACAGGGGAAGAATCTCCTTCTGATGGGACCGCTTTTATTTTTGGAAAAGATATATGTTCCCATCCAAAGGCTGCTCGTCGATATATTGGATATTGTCCACAATTTGATGCCCTATTGGAATACTTAACTGTTCAAGAGCATCTTGAACTTTATGCCAGAATAAAAGGTGTTCCAGATTTTGCAATTGAAAATGTATGCGTTGTTATGGAAAAGTTGGCCGAGTTTGACTTGTTGAAACATGCCAATAAACCATCATTTTCGCTTAGTGGAGGAAATAAAAGAAAACTGTCTGTTGCAATTGCAATGATTGGTGACCCACCTATAGTCATTCTTGATGAACCATCCACAGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACTGCAGTAATTCTGACTACACACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTTGGTGGACAATTGCGATGTATTGGAAGTCCACAGCATCTAAAAACAAGATTTGGGAATCATTTGGAACTAGAGGTCAAACCTACCGAAGTGAGTTCTGCAGACTTGCAAACCCTCTGCCAAGATATTCAAGAAAGACTTTTTGAAGTCCCGTCTCATCCTAGAAGCTTACTTAATGACCTTGAAATTTGTATTGGGGGCACTGACTCTGTCACATCAGGAAATACCTCCATTGCGGAGATTAGCTTGACAGGAGAAATGATAAGCTTAATTGGGCACTGGCTTGGTAATGAAGAAAGAGTAAAGACATTGATCTCTTGTACGCCTGTCTTTGAAGGAGCTTCTCATGAACAATTATCAGAACAACTGTTTCGTGGTGGTGGCATTCCATTGCCAGTATTTTCTGAGTGGTGGCTGTCTAAACAAAAATTCTCAGAAATTGATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGGTGCCAAGGGTGCAATGGTTTGAGCATCAGATATCAGGTATTTTTAGGTTAA 1050 0.3971 GFIIPKLCFAFQTGEESPSDGTAFIFGKDICSHPKAARRYIGYCPQFDALLEYLTVQEHLELYARIKGVPDFAIENVCVVMEKLAEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSADLQTLCQDIQERLFEVPSHPRSLLNDLEICIGGTDSVTSGNTSIAEISLTGEMISLIGHWLGNEERVKTLISCTPVFEGASHEQLSEQLFRGGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGCNGLSIRYQVFLG 349
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03077 349 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 216 IPR026082 GO:0016020|GO:0055085|GO:0140359
Vimu6g03077 349 FunFam ATP binding cassette subfamily A member 5 8 212 - -
Vimu6g03077 349 CDD ABC_subfamily_A 13 189 - -
Vimu6g03077 349 Pfam ABC transporter 13 127 IPR003439 GO:0005524
Vimu6g03077 349 ProSitePatterns ABC transporters family signature. 100 114 IPR017871 GO:0005524|GO:0016887
Vimu6g03077 349 Gene3D - 9 206 IPR027417 -
Vimu6g03077 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 193 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu6g03077 Vimu-Chr6 27107713 27112036 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03077 K05643 - gmx:100803263 619.387