Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03061 ATGGCGTGCAATGGCTCTGGCTGCCAATCCGGTTCGTGTTACAAAGACGAAGACGCATCATCTAACCAACCAATTAAATCCAAAGAAACCGATTCAACAAACCCTACCAATGTCTGCATCAAGTGCAAGCTCAACGACGCTGTTTCCGGCTACGGCGGAATCGACGACGGCCGTTTCTGCGCCGATTGCTTCAAAACCAACTTATTCGGAAAGTTTCGTTTCGCTGTCACTTCAAACGCCATGATCACGCCCACCGATAAGGTCCTCGTTGCCTTCTCAGGTGGCCCTTCTTCCAGGGTAGCTTTGCAATTTGTGCATGACATGCAAGAGAGGGCTCAGAGGAACTTTGATGCGAGTAGGGATAGGTCTTTGCCGGTCTTTGGTGTTGGAGTTGTGTTTATTGATGAGAGTGCCGTCTTATCTATTCCTTCCAGTGAAATGGAGGAAGCTGTTGAAGTTATTAGAGAGGTTGTGTCTTGTTTAGCGTCGCCGACGAAGGAGTTGCATATTGTTCCCATTGAGACGGTTTACTCGTCGGATTCTGGTGATGGGAAGGAGAGGCTAATCAAGGTTGCTTCAGAATGTGGGTATAACAGGATCGTTCTGGGGTCATGCATTTCTAGGATTGCTTGCCATGTCATTTCAGCCACCGTGAAGATTCTCTATCACAACAAGTCCGATTGGAGTCCCATCCTCGAATCTAAGGACACTATGCCATCCCCCAAGGAGAGAGCCATGGTGGCAGCATCCGCCGATGACGTCAAGAGGAGTGACAACAAAGCCATTGCAAAGGCTTACTGCCATCACTTCCATTGCCACTGCAAAGGCACACTGCTGTCATTTCCTGTGCCACTGCAACACATCCAAAGAGTTGAGCTGCATCACTTCCAGTGTTTTCAAGGACTGACTGCGTCACTTCCAGTGCGTTCAATGGTTAGGCCATATCCGGTCCAAGATAAGGTGTCTGACGTCATGTTGTACAGCACCTGTTGGGGTCAAGGATACTCATTACCTGCAGATATACAATATGTTGATGCTAGATGGGAAGTTCCTGTTGTACTTCCTCTGCGTGACTGTTTTGCCCAAGAGATCAACATGCTTTGCCACCTTGATGGGTTTGGCAGTCTAAAGACTGTGAAGTTGTCTTCAGGTCCGTGCTCTAGCATTAATCGCTTGGTATCATCTTTTGTGTCTTTATTGCAGGAAGAAAACCCATCTCGAGAGAGTACAATTGTAAGAACAGCCGGTAAACTCACTCCTTTTCAATTCAATAGGATTCCAGAGATCATTGATGGAAATGTTCCTTTGGCAACTCGAAGACGACAGAAGAGATATAATCTCAAAACAAATGAGTCTGTTTCCTCTGAATCTTTCTGTCCTCTCTGCAACAGCCCACTCAACAAGAGTGAGATTGTTGATTGGAGCAATATGGATAGCCACAGAAGTAGTGACAGTTTTTACAATACCTGCTGTTCAAGTTGTCAGTTTCAGATTCTTCCAAGTGATTCAACATCAATCGAACAATTTTATATGGATTTACCTCAACCAATGGTTAGCCGAGCAAAGCAAGCTAGCCATGGTAATTTGAGTCTGCTAAGGTGA 1602 0.46 MACNGSGCQSGSCYKDEDASSNQPIKSKETDSTNPTNVCIKCKLNDAVSGYGGIDDGRFCADCFKTNLFGKFRFAVTSNAMITPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDASRDRSLPVFGVGVVFIDESAVLSIPSSEMEEAVEVIREVVSCLASPTKELHIVPIETVYSSDSGDGKERLIKVASECGYNRIVLGSCISRIACHVISATVKILYHNKSDWSPILESKDTMPSPKERAMVAASADDVKRSDNKAIAKAYCHHFHCHCKGTLLSFPVPLQHIQRVELHHFQCFQGLTASLPVRSMVRPYPVQDKVSDVMLYSTCWGQGYSLPADIQYVDARWEVPVVLPLRDCFAQEINMLCHLDGFGSLKTVKLSSGPCSSINRLVSSFVSLLQEENPSRESTIVRTAGKLTPFQFNRIPEIIDGNVPLATRRRQKRYNLKTNESVSSESFCPLCNSPLNKSEIVDWSNMDSHRSSDSFYNTCCSSCQFQILPSDSTSIEQFYMDLPQPMVSRAKQASHGNLSLLR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03061 533 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 33 502 IPR019407 GO:0000049|GO:0002098|GO:0034227
Vimu6g03061 533 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 188 524 IPR019407 GO:0000049|GO:0002098|GO:0034227
Vimu6g03061 533 MobiDBLite consensus disorder prediction 1 34 - -
Vimu6g03061 533 Gene3D HUPs 318 489 IPR014729 -
Vimu6g03061 533 Gene3D HUPs 38 240 IPR014729 -
Vimu6g03061 533 Pfam Cytoplasmic tRNA 2-thiolation protein 2 388 476 IPR019407 GO:0000049|GO:0002098|GO:0034227
Vimu6g03061 533 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 209 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03061 K14169 - gmx:100804325 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03061 6 26926953 26932474 Vimu6g03061 6 26926953 26932474 ECH