Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03060 ATGGCTTCTTTAGTATCTTCACCGTTTACTCTACCAAGCTCTAAACCTGACCAGCTTCATTCTCTTGCCCAAAAGCGTCTTTTTCTTCATTCTTTCCTTCCCAAGAAGGCTGGTTATAATGGTAGCTCAAAATCCTCTCTGAGAGTGAAATGTGCTGCCGTTGGCAATGGTCTATTCACCCAAACCAGCCCAGAAGTTCGTAGAATTGTCCCAGAGAATGACCAAAATTTGCCAACGGTTAAAATTGTGTATGTGGTCCTTGAGGCCCAGTATCAATCATCTCTCACTGCTGCAGTCCTGGCTCTCAACAGTAAAAGGAAACATGCTTCCTTTGAGGTTGTGGGTTACTTGGTTGAGGAGCTTCGAGACGCTTCAACGTATGAGACTTTCTGCAAGGACTTGGAGGATGCTAACGTCTTCATTGGGTCTTTGATTTTTGTGGAGGAGCTTGCTCTCAAGATCAAAGCTGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGTGATGAGGCTTAACAAGTTGGGTTCCTTCAGCATGTCACAGCTTGGGCAATCTAAGAGCCCCTTTTTCCAGCTCTTCAAGAGAAAGAAGCCTCAGTCTGCTGGCTTTGCCGACAGCATGTTGAAGCTTGTGAGGACATTGCCAAAGGTTTTGAAGTATTTGCCAAGTGATAAAGCTCAGGACGCCAGGCTCTATATACTGAGTCTGCAATTTTGGCTTGGAGGATCTCCTGATAACTTGCAGAACTTCCTGAAAATGATTAGTGGATCTTATATTCCAGCACTGAAAGGTACAAAGATTGAGTATTCTGAGCCGGTCTTGTACTTGGACAATGGAATTTGGCACCCTTTGGCTCCTTGTATGTACGATGATGTGAAGGAGTACTTGAACTGGTATGGTACTAGAAGGGATGCAAATGAGAAGCTGAAGTCTCCGAATGCACCTGTCATTGGTTTGGTTTTGCAAAGGAGTCATATTGTGACTGGTGATGATGGACACTACGTGGCTGTGATCATGGAGCTGGAAGCTAGAGGGGCTAAGGTCATTCCCATTTTTGCTGGTGGACTTGACTTTTCAGGGCCAGTGGAGAAATTCTTCATTGATCCAATTACGAAGAAACCGTTTGTGAATTCTGTAGTATCCCTCACTGGCTTTGCTCTTGTTGGAGGGCCAGCAAGGCAGGACCATCCAAGGGCGGTTGAGGCTTTGATGAAACTTGATGTTCCTTACATTGTTGCCCTGCCACTGGTGTTTCAGACAACAGAAGAATGGCTCAACAGCACTCTTGGTCTGCATCCAATACAGGTTGCTCTTCAAGTTGCTCTGCCAGAGCTAGATGGAGGCATGGAGCCAATTGTTTTCGCTGGTCGAGATCCTAAAACAGGTAACCATGATCTCTTTTCTTTACAACGCACTTTTAACTTTTCTTGA 1458 0.4527 MASLVSSPFTLPSSKPDQLHSLAQKRLFLHSFLPKKAGYNGSSKSSLRVKCAAVGNGLFTQTSPEVRRIVPENDQNLPTVKIVYVVLEAQYQSSLTAAVLALNSKRKHASFEVVGYLVEELRDASTYETFCKDLEDANVFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYIPALKGTKIEYSEPVLYLDNGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVTGDDGHYVAVIMELEARGAKVIPIFAGGLDFSGPVEKFFIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGNHDLFSLQRTFNFS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03060 485 Pfam CobN/Magnesium Chelatase 246 468 IPR003672 GO:0009058
Vimu6g03060 485 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 28 471 IPR003672 GO:0009058
Vimu6g03060 485 Pfam Domain of unknown function (DUF3479) 81 242 IPR022571 GO:0016851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03060 K03403 - gmx:100787735 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03060 6 26919094 26920551 Vimu6g03060 6 26919094 26920551 ECH