Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03046 ATGGCTGTGAAGGACGACGTGGAAATATTTAAGGCTCGCATCGACAAGAGGGATTACAGAAGAGTCGTGCTTAGCAACTCGCTCCAAGTGCTCCTCATTAGCGATCCCGTTACCGATAAGTGTGCTGCTTCCATGAACGTTGGCGTTGGTTACTTCAGTGATCCTGCTGGCCTCGAAGGCCTCGCCCATTTCCTCGAACACATGCTGTTTTATGCGAGTGAAAAATACCCAGTTGAAGATAGCTACTCCAAGTATATTAGTGAGCATGGAGGAAGCACCAATGCTTTTACATCATCTGAACACACCAACTATTATTTTGAAGTTAACACAGACGGCTTTGAAGAGGCCCTGGACAGATTTGCTCAGTTCTTTACTAAACCATTGATGTCTCCTGATGCCACCATGAGGGAAATTAAAGCTGTTGATTCTGAAAACAAGAAGAATTTATTATCTGATGCATGGAGAATGAACCAGAGTGGCCACAGAATGTTACATTGTATCAGTGCCTTTTTGAATAGTGGATGTAGTGGTTGCAATTGCAGCCAAAATAGTGGCCATTGTGGATCTAGAGTAAGGCTTTTTGCAAAACCGATTTTTCCCTCAGAACAACCTCAGTTTTCGTTGGGGGTGTGGGGGAACTGGGACACTTTGGAAGTTAAACCTAAAGCAAGAGGATTAGACACAAGGGAGGAGCTTCTCAAGTTTTATGATGAAAACTATTCTGCTAATTTAATGCATCTAGTTGTATACACAAATGAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTATAAACACCAACAAAAGTTGTTTCCATCCTTGTGGTCAGCCATGCAAATCAGAACATTTGCAGATTGTTGTCAGGACTGTCCCAATAAAGCAAGGTCATAAATTGAGAATCACATGGCCAGTAACCCCTGAAATTCATCATTACACCGAAGGGCCAAGCAGGTATCTCGGCCATCTCATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTAAAAAAATTGGGGTGGGCTACAAGCTTGTCTGCAGGTGAATCAGATTGGAGTTTGGATTTCGCATTCTTTTCCGTTGTAATTGATCTTACTGATTCTGGTCATGAGCACGTAGAAGATATCATTGGGTTGTTGTTCAAATACATCGAGCTTCTACAACACTCTGGTGTTTGCGAATGGATTTTTAAAGAGCTTTCAGCAATTTGTGAGACCAAGTTCCATTATCAGGACAAAATTCCTCCCAATGATTATGTTGTTGATATTGCATCAAATATGCAGTTTTATCCTGTGAAAGATTGGTTGACAGGATCATCCTTGCCTTTTAAGTTTAGCCCAAATGTTATCCATATGGTACTAGGTCAGCTTTCTCCAGACAACGTTCGAATCTTTTGGGTGTCCAAAAATTTTGAAGGGCATACTGATAAGGTGGAGCCATGGTATGGAACTGGGTATTCCCTTGAAAAGATCACTGGCTCTGTTATTCAGGTGAAGTTCCCAGTTTTGTTAAGGAGGTCAACTTATTCAGCTTTATGGTACAAGCCAGACACATTGTTTTCTACACCCAAGGCTTACGTTAAGATTGATTTCAATTGCCCATATGCTGGAAGCTCTCCTGAGGCTGAGGTTTTGGTGCATATTTTCACACAATTATTGATGGATTACTTGAATGACTATGCTTATTATGCTCAGGTTGCTGGTCTATATTATAGCATAACTCACACAGATGGTGGTTTCCAGGTGACACTCCTTGGTTATAATCACAAGTTAAGGATATTACTCGAAACAATAGTTGAGAAGATTGCAACATTTGAAGTGAAAACTGACAGGTTTTCTGTCATCAAGGAAATGGTAACCAAGGAATATCAGAATATGAAGTACCAACAACCTTATCAGCAGGCTATGTACTATTGCTCTTTGATCTTACAAGATCATACCTGGCCTTGGATAGAACAACTCGACTTGCTTCCTGCTCTTCAAGTTGAAGATGTTGCTAAATTTGTACCATTAATGCTCTCCAGGACATTTTTAGAGTTCTATATAGCAGGGAACATTGAAAGCCATGAAGCAGAGTCAATGGTCAAGCACGTAGAAAATGTTCTCTTTAATTATTCAACACCTCTGTGCAAACCTTTATTCTCATCTCAACATTTGGTGAATCGGGTTGTTAAACTTAAAAGTGGTATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAAATGAGAATTCTGCACTTCTGCACTATATACAGGTTGGTCGCGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCTCTTGTTGCAAAGCAACCAACCTTTCATCAGCTACGATCGGTTGAGCAGCTGGGGTACATTACTGTGCTCTTGCAGAGGAATGATTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGAAAAGTCTCCCGGGAACATTGAGCAAAGGGTCGAGGCATTTCTCAAAATGTTTGAGACCAAGATTTATGAGATGACAATTGATGAGTTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATCTGAGGGAAGAATCATCATTTTTCTGGCGAGAGATTAACGATGGTACTTTGAGGTTTGATAGGAGAGAGCATGAGGTTGAAGCATTAAGGCAGCTCACTCTTCAAGAATTGATAGATTTCTTCAATGAATATGTGAAAGTTGGTGCAGCTCGAAAGAAAACTTTAAGTGTGCGAGTTCATGGGAACAGGCATTCATCTGAGTACAAAGCCGAAGTCTCAGAACCAAACTTTGCTAGAATAGATAATATATTTACATTTAGAAGATCACAGTCTCTTTATGGTTCATTTAAAGGACTTTCTGGGCAGATGAAATTATAG 2904 0.3984 MAVKDDVEIFKARIDKRDYRRVVLSNSLQVLLISDPVTDKCAASMNVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYISEHGGSTNAFTSSEHTNYYFEVNTDGFEEALDRFAQFFTKPLMSPDATMREIKAVDSENKKNLLSDAWRMNQSGHRMLHCISAFLNSGCSGCNCSQNSGHCGSRVRLFAKPIFPSEQPQFSLGVWGNWDTLEVKPKARGLDTREELLKFYDENYSANLMHLVVYTNESLDKIQNLVEEKFQDIINTNKSCFHPCGQPCKSEHLQIVVRTVPIKQGHKLRITWPVTPEIHHYTEGPSRYLGHLIGHEGEGSLYYILKKLGWATSLSAGESDWSLDFAFFSVVIDLTDSGHEHVEDIIGLLFKYIELLQHSGVCEWIFKELSAICETKFHYQDKIPPNDYVVDIASNMQFYPVKDWLTGSSLPFKFSPNVIHMVLGQLSPDNVRIFWVSKNFEGHTDKVEPWYGTGYSLEKITGSVIQVKFPVLLRRSTYSALWYKPDTLFSTPKAYVKIDFNCPYAGSSPEAEVLVHIFTQLLMDYLNDYAYYAQVAGLYYSITHTDGGFQVTLLGYNHKLRILLETIVEKIATFEVKTDRFSVIKEMVTKEYQNMKYQQPYQQAMYYCSLILQDHTWPWIEQLDLLPALQVEDVAKFVPLMLSRTFLEFYIAGNIESHEAESMVKHVENVLFNYSTPLCKPLFSSQHLVNRVVKLKSGMNYFYPSECLNPENENSALLHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLLQRNDCGIRGLQFIIQSTEKSPGNIEQRVEAFLKMFETKIYEMTIDEFKSNVNALIDVKLEKHKNLREESSFFWREINDGTLRFDRREHEVEALRQLTLQELIDFFNEYVKVGAARKKTLSVRVHGNRHSSEYKAEVSEPNFARIDNIFTFRRSQSLYGSFKGLSGQMKL 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03046 967 Gene3D - 280 502 - -
Vimu6g03046 967 SUPERFAMILY LuxS/MPP-like metallohydrolase 209 274 IPR011249 GO:0046872
Vimu6g03046 967 SUPERFAMILY LuxS/MPP-like metallohydrolase 282 503 IPR011249 GO:0046872
Vimu6g03046 967 Pfam Peptidase M16 inactive domain 665 852 IPR007863 -
Vimu6g03046 967 Pfam Peptidase M16 inactive domain 228 404 IPR007863 -
Vimu6g03046 967 Gene3D - 503 728 - -
Vimu6g03046 967 Pfam Insulinase (Peptidase family M16) 30 163 IPR011765 -
Vimu6g03046 967 FunFam nardilysin isoform X1 279 503 - -
Vimu6g03046 967 Gene3D - 2 274 - -
Vimu6g03046 967 SUPERFAMILY LuxS/MPP-like metallohydrolase 728 955 IPR011249 GO:0046872
Vimu6g03046 967 FunFam Insulin-degrading enzyme 504 728 - -
Vimu6g03046 967 SUPERFAMILY LuxS/MPP-like metallohydrolase 501 712 IPR011249 GO:0046872
Vimu6g03046 967 SUPERFAMILY LuxS/MPP-like metallohydrolase 5 159 IPR011249 GO:0046872
Vimu6g03046 967 ProSitePatterns Insulinase family, zinc-binding region signature. 50 73 IPR001431 GO:0004222|GO:0006508
Vimu6g03046 967 Gene3D - 729 962 - -
Vimu6g03046 967 PANTHER NARDILYSIN 3 951 - -
Vimu6g03046 967 Pfam Middle or third domain of peptidase_M16 413 502 IPR032632 -
Vimu6g03046 967 Pfam Middle or third domain of peptidase_M16 503 659 IPR032632 -
Vimu6g03046 967 FunFam Insulin-degrading enzyme-like 1 peroxisomal 729 961 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03046 K01408 - gmx:100804856 1646.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03046 6 26846777 26873592 Vimu6g03046 6 26846777 26873592 ECH