Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03033 ATGAGAAAAAAAGTCACTAATAAGGTCTCCGGTGTTATTTCCCGCCAAGTTTTGCCTGTTTGTGGCAATCTTTGTGTCTTCTGCCCTGCTCTGAGGGCAAGGTCAAGACAACCTGTTAAGAGGTATAAGAAGCTCATTGCTGATATTTTTCCTCGTAATCAGGAGGAAGGACCAAATGATAGGCAAATAGGAAAACTATGTGATTATGCTGCCAGAAATCCTTTACGCATACCAAAGATCATGCAGGTCCTTGAGCAAAGATGCTACAAGGAGTTACGAAACGAGAATCTCCATTCAGCTAAAATAGTGATGTGCGTTTACAGGAAATTTTTATTTTCTTGTAAAGAGCAAATACCATTGTTTGCGAATAGCTTGCTAAGTATTATTCACACGCTACTAGATCAATCACGTCAAGATGAAATGAGAATTATAGGATGTCAAGTTTTGTTTGATTTTGTAAATAATCAGAATGATGGAAGCTACCTATTCAACTTAGAAGCTGTTATCCCGAAACTTTGTCTATTAGCCCAAGAAACAGGGGATGACGAAAGGGCAAGAACCAGTCGTTCAACTGGTTTGAAAGCACTTTCAGCAATGGTTCGATTTATGGGTGAAAATTCTCACATGTCGGTTGAATTTGATAATATCGTTTGTGTTGTCTTGGAAAATTATGAAATTCCCAAAGACAATTTAGAAAATACTGATGATGAGGAAAAAGGAGTCGAGAATACGTGGGTTGAAGATGTGATGGCCAATGAGGATGAAAACTCTCCTTTGCATGATGTCAAAACGAGGAACCCTTCGTGGTCGACAGTTGTTAACGATAAAGGCGAATTGATTGTAGCAATGGAAGATGACAAGAATCCCGCTTTTTGGTCTGGGGTTTGTCTGCATAATATGGCCAACTTAGCCAAGGAGGGAACTACTATACGTCGTGTGATGGAATCTGTATTCCGGTACTTCGATAATGGAAACTTATGGTCTATAGACCATGGCCTTGCCATTTCTGTTTTGAAGGATATATTATTTTTGATGGATGATTCGGAGAAAAACACACATGTGTTGCTATCAATGTTAATTAAGCACATGGATCATAAAACTGTCCTTAAAGAACCTCATATGCAACTTGACATTGTTGAGGTCACCACTTCACTTTCCCGATATGCAAAGGTCCAACCTTCTGTATCGATAATTGGTGCAGTGAGTGATATGATGAGACATTTGCGGAGGTGCATACATTCTTCCTTAGATGAGTCAAATATGTCCCCCGATGAAATAAACTGGCATAAGAATTTCAGAAGAATTGTGGATAAGTGCCTTGTAAAGTTGTCAAATAAGGCATTCCCTGAGACCTTGCTTCATCAATTGCTCCAGGCTATGGTCCATCCAGATCATGAAACAAGAGCAGTAGCTCATCGTATCTTTTCTGTTATTCTTGTGCCAGCCTCTATGTTTCCTGGTCCAAGCTTGTCTATTTCTGACCGCAAGCCATCAAGTGTTCCACGAACTCTCTCACGAGCAGTCTCTGTTTTCTCTTCTTCAGCCGTCTTATTTGAGAAGTTAAGACTGGAGAAAGGTTCAAGTGAAAAATCAATTCAGTATAAAGAAAATAATTCTGGAGAGGTTGACTCAGCTAATAGCAATGGTGGGATCGTAAACAAGTTAAAGTCAATGCATAATCGGGTGAATAGCATAAATAATCCTCCCCTACAATTCGAAGTTGATGAAATTGCTGCAAAAAATGATGATAAAAACTCGATGGTTGCTGCTCTTAAGCTGAGTAGGGTTCAGATAAATCGATTACTATCATCAATTTGGGTACAATCTATATCTCCTAATAATGTGCCTGCAAATTATGAAGCAATTGCTCATTCATACACTTTGATGCTGCTTGTTTCAAGAGAAAAGAATTCATATCATGAGTTACTGGTTCGAAGTTTTCAACTTGCTTTTTCTTTATGGAATATTTCTCTAAAGGAAGGGTCATTACCACCATCTCGTCGAAGATCACTCTTTACTCTGGCTACTTCAATGATTGTGTTTTCTTCAAAAGAATACAACATTGACCGTCTTGTCAAAAGTGCCAAAGGAGTGCTTTTGGATAAAAAGATTGATCCTTACCTTCAATTAGTTGAAGATTATAAGTTGCAAGTTGTCAACTTTCCACCAGAAAGTCCAACCATCATCTATGGATCTAAAGAAGACGATGATAGGGCCACACAAACGCTTTCCGAGTTATTGGGTTCTATTAACGAAACACGAGAAATCTTTGCTTCTGAAATCATTAAGTGCTTGGAGATGTTTGCAAAAGCCGAATTATCTTCAATTAAGGAACAACTGCTGGAAGACTTTGCACCGAATGCTATAAGTGAACTTGGATCTCAATTAACAGTGAATATGGCCACAACGGGTGCTTTAATGGCTGACGACTTCACTTTTGAACCATTTGAAAGTCAAACTAAACTAAATCGTGCTTTATCCGTAGAGGCTTCGGAAACACCTAATCCAGCTGGGAGGATTTCTGTATCAACCGCATCTTTCATGCCATACAATGATATGGCTGATAAGTGTGAGGTGCTTTTGATGGAAAAGCATAGGATGTCTAGATTGATGAGTTCCCAACAAAAGCAAGATAGTTTAGAGGACTCTCTTCTGATCAATCAAAATAACGTATTCAAAAACATGGAATCCTCTAACCAAATGGATTTCCAGAAGGTGGGCATTCCTCCCTTTGATGATAATGTTGGTGTGGATTTATACAGAGGAACTTCTGGTGCTCTTCCAATGTTGTGTGCAACTGAATATCAAACTCTTCCTCATTCTTTCCAACTTCCAGCAGCAAGCCCCTATGATAACTTTCTAAAAGCTGCTGGTTGTTGA 2880 0.3896 MRKKVTNKVSGVISRQVLPVCGNLCVFCPALRARSRQPVKRYKKLIADIFPRNQEEGPNDRQIGKLCDYAARNPLRIPKIMQVLEQRCYKELRNENLHSAKIVMCVYRKFLFSCKEQIPLFANSLLSIIHTLLDQSRQDEMRIIGCQVLFDFVNNQNDGSYLFNLEAVIPKLCLLAQETGDDERARTSRSTGLKALSAMVRFMGENSHMSVEFDNIVCVVLENYEIPKDNLENTDDEEKGVENTWVEDVMANEDENSPLHDVKTRNPSWSTVVNDKGELIVAMEDDKNPAFWSGVCLHNMANLAKEGTTIRRVMESVFRYFDNGNLWSIDHGLAISVLKDILFLMDDSEKNTHVLLSMLIKHMDHKTVLKEPHMQLDIVEVTTSLSRYAKVQPSVSIIGAVSDMMRHLRRCIHSSLDESNMSPDEINWHKNFRRIVDKCLVKLSNKAFPETLLHQLLQAMVHPDHETRAVAHRIFSVILVPASMFPGPSLSISDRKPSSVPRTLSRAVSVFSSSAVLFEKLRLEKGSSEKSIQYKENNSGEVDSANSNGGIVNKLKSMHNRVNSINNPPLQFEVDEIAAKNDDKNSMVAALKLSRVQINRLLSSIWVQSISPNNVPANYEAIAHSYTLMLLVSREKNSYHELLVRSFQLAFSLWNISLKEGSLPPSRRRSLFTLATSMIVFSSKEYNIDRLVKSAKGVLLDKKIDPYLQLVEDYKLQVVNFPPESPTIIYGSKEDDDRATQTLSELLGSINETREIFASEIIKCLEMFAKAELSSIKEQLLEDFAPNAISELGSQLTVNMATTGALMADDFTFEPFESQTKLNRALSVEASETPNPAGRISVSTASFMPYNDMADKCEVLLMEKHRMSRLMSSQQKQDSLEDSLLINQNNVFKNMESSNQMDFQKVGIPPFDDNVGVDLYRGTSGALPMLCATEYQTLPHSFQLPAASPYDNFLKAAGC 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03033 959 PANTHER PUTATIVE, EXPRESSED-RELATED 11 446 - -
Vimu6g03033 959 SUPERFAMILY ARM repeat 66 479 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03033 Vimu-Chr6 26780595 26787997 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03033 K21842 - gmx:100817296 1384.78