Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03009 ATGGAGGGAGAAGAAGAGTTGCTGTGGAAATCGGAGCCACAACGCGAGTCCATCGTCTCCGTCACGCTCGCACGTGCCATCACTTCTCTTCTCACTTCCCGTCCAAAGAAGCTTCACGACTCTATTTCTCGCCTCTCCTCACATTCTTCGCGCTCGCACACTTCACTCGTTTCCCTCGAAGACTCTCTCTGGTTTTTCCACAGCTACGTTGCCGACGCTGCCACCAATAATTCTTCCCTCGACCAAGTCCTTCTTCCAATCATCGACAGCGTGTTAAAGTCCAAGCATGGTGACCAAGCTATGCTTCTGTTGAACTGGCTCTTCCAGGACGAGCTTCTTTTCCAACCCGTTGCCGAGGCTCTGGCTGGCGTCGTTGCCAGAAAGCACGTGCACGATCGCTACTTGTTGCTTGGTTGGTGCCTCCTTCTTCGGAATCTAGTTGAATTTGAAAGTTCCGCTCATCAATCCATGTTTAGTGGGATACGGGAGAGGTATGGAGATTTGTTGAAGATACTCTCCTCTTGTCTTCCGGATTTGGCCAGTATTGTTAATAAAGGAAGCACTTTGCAGGATGGTTTTGAATTGCCATCTCGCCTTGGAGTGTCTGCAGCTGATTGTTTTTTGTCCCTTTCGGGAGCATTAACAAAAATGGCAGACAATAAAAAGTTGAAAGTAAATGCTAGAGCAAAAGATCAGGCAATTATTTTTGTACATTCTCCTACTACTGACAAGAAGGAGAAATTGAATTCAAAATTTTTAATGTCAATGATCGAAAGGGACTTTACTCTGTGGCATCATTTAGATGGCATTATTTGTTTGGTTCGAAGACTCCTTTCTTGGAGCAGGAAAAGTCGTTTTTTACATGCCAAAGGCTTGGAGCAAGTTCTTAAATGGCTGCAGGAGATAAAGAATCACCATGGATCCTTTCAACTAGAGGCAGCATTGAAGACTGATTCTAATGCTCTCAAGACTGGAGATTTACTGCTCTGTTCTTGCTGGAAGCATTATAGCGTGCTACTGCACCTGGAAGATAAGAAGTTCTCGCAGCATTACAAGGAACTGTTGGACCAGTATATGTCTGGCATCCAGCAACTACCTTATGTCCCAGTTGATATGGATGGCAAGGTGTCTCTATTTGATGTTGCGGAGGGTGATAAACTGGAATTTGCCTTTGACTATCTGGATAGTGTCTCATGTGCAATTTTTGGCAGTCTTGTGTATTATATGGACAACCACACAGGTGGTGGCTATATTGACAACAATGATGGTGGGTTGGAGACCAGAAAGTTCTTTTTGAATTGTTTATGCCTGCTTTTGGGACGTCTGGATATCAAGAGATTTGAAAGCACAGTGTCAGAGTTTGGGATGAATATCTCACGCATTCTAGTACCACAGCTTAATTGCACTGATGAGGATGTGATAGCTGGAGTTGTTTCAATATTCAAGGCTATCATTCTGAGGCCAGATTACTCACAAGAAGATGCACCTCCTGACAGTAGGAAGGCAAATAGTGTGATTCCTTTTCTGCTACACCTTTTAGATGAGCGGGATGGTACAGCTAGAGCTGTTGTTATGCTGATAGGAGAATACTGCTCAATGAGCAAAGATGATCACTGTCTTATGGAAGTTCTGAAGCGCCTTTCTTCTGGAAACATTTCCCAGAGAAGAAATGCTATGGATGTTATATCAGAAGTCCTACATATATCATCGGAATCACAAAGTTTAAAGTCTTGTTCTGCTAGGCAAGATATAGCTAACAAATTGCTAGAGCGGCTTGGAGATGAAGAAATTATGATTCGTGAACAGGCATCCAAATTACTTCCAATGATAGACCCTTCATTGTACTTGCCTGCACTGGTTGGTCTTGTTTACTCTTCAGATGAGAGACAATCAATTGCTAGTGATTCCATCATTGAGGTAGGTTTCCTTTTCTTTGCTCCTTCTACTCGGCCTCTAAATTTTGGAGCTCAACTTATAGAAACTGTTTCTAGAGTGAAGATATCACTAATGGCTAAAATTTTGCCTTCTTATCCTTGTAGCAATACCAGTATAAGCCTAGACCTTCTACAGTCCAATGGAGATGAAGGATTGGTGAAAGTTTCATATCAAGATGGGAGCAAAGAACCTACACAAGTGAAGAGTTTGAAGAAATGCAGCGATCTCTTTTTGAGCGTAGATGCAGCAAACAGGAACACTGATATTGATTGTGATTGTATCGCTGGTTTCCTTCTAAACAGGGCTTTTTGTGAGTTTGAATTTGAAGATGTTCGGAAGCTCTCTGCTGAGCTGTGTGGACGCATTCATCCACAAGTCAGAGGATGGGAGACACTTTCTCATCGTTCAATGTATGCAATTAGAGAGATGATTGAAACTGTATTGTTATGGCCTTGTCTGAACGCTGATTCAGTTTCTAAAGCACAACACGGATGCATTGATTGTCTAGCACTAATGATATGTGCTGAACTACAAGCTAAGGAATCAATCACTTCCATGCCTGGCAAAATTAGGGCCATTGGAAAAGAAGGGAAGTCTGTTGTCAGCTATGTGATCAATCAGTTCTTTAACTACAAGAACGAACGAACTTCAACTCCTGAGTTTGGGGATGAAAACTCAGAATTTGTTCCTGCTTCAGTTTCTCTCTCTTTTAGTCTGTGTATGGGTAATGTTCTCATTAGCACTTGCCAGAAGATACCTGAATCTTGCAAGAAGCCCTTTGCAGCACAAGTTATTCCTATTCTCCTTCAATCTCTTGAGTTTGAAACGAAGTCAGAGATTAGAGCAGCATGCACCCATGTTCTATTTTCAGCGGTCTATCATCTAAGATCTGCAGTTCTTCCCTATGCATCTGACCTTCTCAGAATTGCCCTAAAATCCCTAAGGAAGGAGTCAGACAAGGAAAGGATAGCAGGTGCGAAGCTCATAGCATCACTAATGGCCAGCGAAGATGTGATTTTGGAAAACATATCTGTTGGACTATTAGAAGCCAGGTCTGTACTCTCAACCATATCTTCGTCAGATCCTTCTCTTGAGTTACAACAGCTTTGCCGCAAGTTGCTAGCATGCATATCTTCTCCTTGA 3078 0.4266 MEGEEELLWKSEPQRESIVSVTLARAITSLLTSRPKKLHDSISRLSSHSSRSHTSLVSLEDSLWFFHSYVADAATNNSSLDQVLLPIIDSVLKSKHGDQAMLLLNWLFQDELLFQPVAEALAGVVARKHVHDRYLLLGWCLLLRNLVEFESSAHQSMFSGIRERYGDLLKILSSCLPDLASIVNKGSTLQDGFELPSRLGVSAADCFLSLSGALTKMADNKKLKVNARAKDQAIIFVHSPTTDKKEKLNSKFLMSMIERDFTLWHHLDGIICLVRRLLSWSRKSRFLHAKGLEQVLKWLQEIKNHHGSFQLEAALKTDSNALKTGDLLLCSCWKHYSVLLHLEDKKFSQHYKELLDQYMSGIQQLPYVPVDMDGKVSLFDVAEGDKLEFAFDYLDSVSCAIFGSLVYYMDNHTGGGYIDNNDGGLETRKFFLNCLCLLLGRLDIKRFESTVSEFGMNISRILVPQLNCTDEDVIAGVVSIFKAIILRPDYSQEDAPPDSRKANSVIPFLLHLLDERDGTARAVVMLIGEYCSMSKDDHCLMEVLKRLSSGNISQRRNAMDVISEVLHISSESQSLKSCSARQDIANKLLERLGDEEIMIREQASKLLPMIDPSLYLPALVGLVYSSDERQSIASDSIIEVGFLFFAPSTRPLNFGAQLIETVSRVKISLMAKILPSYPCSNTSISLDLLQSNGDEGLVKVSYQDGSKEPTQVKSLKKCSDLFLSVDAANRNTDIDCDCIAGFLLNRAFCEFEFEDVRKLSAELCGRIHPQVRGWETLSHRSMYAIREMIETVLLWPCLNADSVSKAQHGCIDCLALMICAELQAKESITSMPGKIRAIGKEGKSVVSYVINQFFNYKNERTSTPEFGDENSEFVPASVSLSFSLCMGNVLISTCQKIPESCKKPFAAQVIPILLQSLEFETKSEIRAACTHVLFSAVYHLRSAVLPYASDLLRIALKSLRKESDKERIAGAKLIASLMASEDVILENISVGLLEARSVLSTISSSDPSLELQQLCRKLLACISSP 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03009 1025 Gene3D - 397 640 IPR011989 -
Vimu6g03009 1025 SUPERFAMILY ARM repeat 425 1022 IPR016024 -
Vimu6g03009 1025 Gene3D - 786 1023 IPR011989 -
Vimu6g03009 1025 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 728 771 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03009 - - gmx:100800773 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03009 6 26605886 26618646 Vimu6g03009 6 26605886 26618646 ECH