Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02994 ATGTTCATTATAATTATAGAGCGAAGATTGTCATCAGAAGCTGGAAGAAGCTTCCCCTATGTAGCTGCTCCTGTTGTGTACAAGCCTCCCTCTTCTGCTAATGTGGCAGAGAAAGTTGCAGAGGCCGGAGGAAAGTCTCACTTGGGAAGAAATGTATCAGATGTTCAGAGAAGAGGATACACCAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCATCTCCATCAGTCACTCATAATGGCAAAGGTAGTCACAAAGAACAAGGGGGCCACCCCACCACAAATTCTAGATACCAACTCCTACGTGAAGTTTGGTCCATGTGA 351 0.4473 MFIIIIERRLSSEAGRSFPYVAAPVVYKPPSSANVAEKVAEAGGKSHLGRNVSDVQRRGYTSDEELEELDSPLTSIIDKLPSSPSVTHNGKGSHKEQGGHPTTNSRYQLLREVWSM 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02994 116 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 13 114 IPR021827 GO:0005643
Vimu6g02994 116 MobiDBLite consensus disorder prediction 42 107 - -
Vimu6g02994 116 MobiDBLite consensus disorder prediction 76 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02994 Vimu-Chr6 26410523 26411302 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02994 - - pvu:PHAVU_001G137700g 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02994 6 26410523 26411302 Vimu6g02994 6 26410523 26411302 ECH