Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02966 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGGCGAGGGACCCAAGCACTGTGATTCACCCAAGGCGCGAGCCCTTCGAGCACGGTCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAACAGAAGCTTCTACAGTTATCCTCCAACCAGCGAGTCGACTCGGTGGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGACACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCACCACCGCGAAGTTCGGAGAAATCGATTCCGTCGGCGTCGACGTGCATGATCTGGTATTGTTTCTCTACATTCAATCCTACAAGAGACTCCTCCCGCGGACGCACAAGGATTCCGCCGCCATCGCCGATGTCTGGCCTTCTACTTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTTGTACGCAGCAACAGTCGGCGGTTTATGCCTTCTCAGGCCGATGAAGAGGCACATCAATTATCGTATCTGCAAAAACACTTGGCTAACATAATGTCTCTTTTAGCAGAGCCTGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACAATGGATAGATTCGAGCATCTTGGATTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAACATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGTACTGTGTCAGTTAAGGTTTCAACAAGTAATAGAGGTGCTAGTTTCATTGAAGGGATATCTAAATCATCATATACAAAGAATGCATCTGACATAAAAGGTTCTTCAGTGAAGGTTCTTAATTGCCACGAGTCTGCCATCTACATCCTAGCACCAGTGAGATACGCCACTGTCTATGGATGTTCGGATGCAACAATAGTTCTTGGAGCAGTTGGCAAGGCTGTGAGAGTGGAACACTGTGAGCGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTATTTTCTTCTTGGGAGTGAATCAGCAACCACTTATGCTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAATTGGAGGAGCATATGAATGAAGTCGGAATTGTTCCTACAGTGAACCGATGGGATGAACCTCTTGCGTTGGGCATGGTCGATCCTCATGATTCGTTATCTCATCCAGCAGGTGGCTCTGATGTTCAAGCTGAGTGTGCTACCCAGGTGGACCCTGATCAGTTCACTAGTTTTGTGATTCCGAGCTGGCTTGGAGGAGACTCCACTGGGTCTGCAGAAGGCAATCCATTCACGCTACCAGATGCTTACAAGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGATAAGGCAACTGATAAGGGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAGTTGTCATCTGCACTCCATGTGTACTTCAAGGACTGGTTATACGATAGTGCAATGAGACAGTTAGCATTAATGATGGTACAGGAACGAGACGTTGGTGTATGGGATCGAAGTGATCCTCAGATATATTTCACCCCGTGA 1749 0.4728 MTEPTEPSTSSSLARDPSTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLQLSSNQRVDSVAISDSLQISIEHARLVLDTLASILHSDSEPLTTAKFGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAIADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSVKVSTSNRGASFIEGISKSSYTKNASDIKGSSVKVLNCHESAIYILAPVRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGGSDVQAECATQVDPDQFTSFVIPSWLGGDSTGSAEGNPFTLPDAYKASQHKNHKNLGEIRQLIREASLEESRKRELSSALHVYFKDWLYDSAMRQLALMMVQERDVGVWDRSDPQIYFTP 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02966 582 Gene3D - 309 461 IPR016098 -
Vimu6g02966 582 PANTHER UNCHARACTERIZED 17 559 IPR039589 -
Vimu6g02966 582 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Vimu6g02966 582 MobiDBLite consensus disorder prediction 1 20 - -
Vimu6g02966 582 MobiDBLite consensus disorder prediction 1 17 - -
Vimu6g02966 582 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 328 400 IPR036223 -
Vimu6g02966 582 ProSiteProfiles C-CAP/cofactor C-like domain profile. 299 435 IPR017901 -
Vimu6g02966 582 SMART carp 337 374 IPR006599 -
Vimu6g02966 582 SMART carp 375 409 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02966 Vimu-Chr6 26137610 26147199 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02966 K16810 - gmx:100780410 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02966 6 26137610 26147199 Vimu6g02966 6 26137610 26147199 ECH